RNA–Protein interactions for RNA: ENST00000053243.5

TNFRSF17-201, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-201ENST00000053243 CACTIN-AS1Q8N1I8 211 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 CCDC185Q8N715 623 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 STK35Q8TDR2 534 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 RNF139Q8WU17 664 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 ATXN2LQ8WWM7 1075 aaKnown RBP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 MAML1Q92585 1016 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 ARHGEF2Q92974 986 aaKnown RBP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 MYLPFQ96A32 169 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 FAM149B1Q96BN6 582 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 SGSM3Q96HU1 749 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 CEP295NLQ96MC4 621 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 RAB6CQ9H0N0 254 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 LRRC4CQ9HCJ2 640 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 XAB2Q9HCS7 855 aaKnown RBP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 WDR6Q9NNW5 1121 aaKnown RBP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 STARD7Q9NQZ5 370 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 ARHGEF4Q9NR80 690 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 TRMT13Q9NUP7 481 aaKnown RBP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 SAE1Q9UBE0 346 aaPredicted RBP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 GPN3Q9UHW5 284 aaPredicted RBP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 XPO7Q9UIA9 1087 aaKnown RBP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 PRDM4Q9UKN5 801 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 TLR6Q9Y2C9 796 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 TEX264Q9Y6I9 313 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 MYO18AQ92614 2054 aaKnown RBP6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 MYLKQ15746 1914 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 ANAPC1Q9H1A4 1944 aa6.6□□□□□ -1.35
TNFRSF17-201ENST00000053243 PTPRSQ13332 1948 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 A0A0A0MRY4 1105 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 TLDC2A0PJX2 215 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ERICH4A6NGS2 130 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 YJEFN3A6XGL0 299 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ERI2A8K979 691 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 DCDC2CA8MYV0 355 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 KBTBD13C9JR72 458 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 E7ENQ6 273 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 M0QYT0 321 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 EBAG9O00559 213 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 NDUFAB1O14561 156 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 TRDMT1O14717 391 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 NRP1O14786 923 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 TM4SF5O14894 197 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 DCLK1O15075 740 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 KCNN4O15554 427 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 STK10O94804 968 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ETS1P14921 441 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 CHN1P15882 459 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 TFE3P19532 575 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 COL8A1P27658 744 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 GCAP28676 217 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 RBL1P28749 1068 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 HOXC13P31276 330 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 GRK4P32298 578 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 GBP2P32456 591 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 STX2P32856 288 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 SERPINB6P35237 376 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ADRA1BP35368 520 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 HNRNPH2P55795 449 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 MAP3K7CLP57077 242 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 GEMIN4P57678 1058 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 BASP1P80723 227 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 GUCY1A3Q02108 690 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 YWHAHQ04917 246 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ELAVL2Q12926 359 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 MTA1Q13330 715 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 MBTPS1Q14703 1052 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 PDK1Q15118 436 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 NFE2Q16621 373 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 LONRF1Q17RB8 773 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 PLEKHG4Q58EX7 1191 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 DNAJC21Q5F1R6 531 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 PPP6R3Q5H9R7 873 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 NOMO2Q5JPE7 1267 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 CLLU1OSQ5K130 101 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 UBAP2Q5T6F2 1119 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ANKRD22Q5VYY1 191 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 HEATR6Q6AI08 1181 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 MSANTD2Q6P1R3 559 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ZNF449Q6P9G9 518 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 NPNTQ6UXI9 565 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 RGS9BPQ6ZS82 235 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ARHGEF18Q6ZSZ5 1173 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 MICALCLQ6ZW33 695 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 LRRC8DQ7L1W4 858 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 TRABD2AQ86V40 505 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 NLRP14Q86W24 1093 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 FAM126BQ8IXS8 530 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 KLHDC8BQ8IXV7 354 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ZBED8Q8IZ13 594 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 DCP1BQ8IZD4 617 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 VPS52Q8N1B4 723 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 FAM71DQ8N9W8 422 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 ZNF473Q8WTR7 871 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 PYROXD1Q8WU10 500 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 C2orf15Q8WU43 125 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 TFB1MQ8WVM0 346 aaKnown RBP6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 LINC01599Q8WXQ3 324 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 HDAC11Q96DB2 347 aa6.59□□□□□ -1.35
TNFRSF17-201ENST00000053243 CHMP6Q96FZ7 201 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms