RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 RGS2P41220 211 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 ZBTB17Q13105 803 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 STX3Q13277 289 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 FASTKD1Q53R41 847 aaKnown RBP13.43□□□□□ -0.26
CTNS-201ENST00000046640 SMYD5Q6GMV2 418 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 SPNS2Q8IVW8 549 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 TNS4Q8IZW8 715 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 MYLPFQ96A32 169 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 PPP1R36Q96LQ0 422 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 SLC2A13Q96QE2 648 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 TAGLN3Q9UI15 199 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 BPTFQ12830 3046 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 HACD1B0YJ81 288 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 ZNF487B1APH4 448 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 MGEA5O60502 916 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 JCHAINP01591 159 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 PGFP49763 221 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 OCRLQ01968 901 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 DLG2Q15700 870 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 LPCAT4Q643R3 524 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 ARHGAP36Q6ZRI8 547 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 RAPH1Q70E73 1250 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 SLC26A7Q8TE54 656 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 CDKL2Q92772 493 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 GBP5Q96PP8 586 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 WWP1Q9H0M0 922 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 NDE1Q9NXR1 346 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 KCNK4Q9NYG8 393 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 DNAJC16Q9Y2G8 782 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 TTC3P53804 2025 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 CAPN14A8MX76 684 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 SNUPNO95149 360 aaKnown RBP13.42□□□□□ -0.26
CTNS-201ENST00000046640 BPGMP07738 259 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 ITGA2BP08514 1039 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 OR4Q2P0C623 313 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 TYK2P29597 1187 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 LBRQ14739 615 aaKnown RBP13.42□□□□□ -0.26
CTNS-201ENST00000046640 RBBP5Q15291 538 aaKnown RBP13.42□□□□□ -0.26
CTNS-201ENST00000046640 HSP90AA5PQ58FG0 334 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 SPDYAQ5MJ70 313 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 C4orf22Q6V702 233 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 OTOP3Q7RTS5 596 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 KCTD13Q8WZ19 329 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 TUBGCP5Q96RT8 1024 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 FERMT1Q9BQL6 677 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 CHRAC1Q9NRG0 131 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 FBXW11Q9UKB1 542 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 G3BP2Q9UN86 482 aaKnown RBP13.42□□□□□ -0.26
CTNS-201ENST00000046640 DFFAO00273 331 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 MSI1O43347 362 aaKnown RBP13.42□□□□□ -0.26
CTNS-201ENST00000046640 LRIG2O94898 1065 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 AKR1A1P14550 325 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 ETS2P15036 469 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 PGAM1P18669 254 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 NFKB1P19838 968 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 NCF2P19878 526 aaPredicted RBP13.42□□□□□ -0.26
CTNS-201ENST00000046640 GLUD2P49448 558 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 FKBP1BP68106 108 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 RASIP1Q5U651 963 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 LRRTM3Q86VH5 581 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.42□□□□□ -0.26
CTNS-201ENST00000046640 ZNF778Q96MU6 729 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 GORASP1Q9BQQ3 440 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 TRIM4Q9C037 500 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 ETAA1Q9NY74 926 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 ZNF212Q9UDV6 495 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 SFMBT1Q9UHJ3 866 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 GTF2IRD1Q9UHL9 959 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 ANGPTL2Q9UKU9 493 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 HBS1LQ9Y450 684 aaKnown RBP13.42□□□□□ -0.26
CTNS-201ENST00000046640 TRPV2Q9Y5S1 764 aa13.42□□□□□ -0.26
CTNS-201ENST00000046640 A0A1B0GVG6 124 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 ANKRD33BA6NCL7 494 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 TXNDC9O14530 226 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 POLBP06746 335 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 CD68P34810 354 aaPredicted RBP13.41□□□□□ -0.26
CTNS-201ENST00000046640 CRHR1P34998 444 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 LHX1P48742 406 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 SDHAF4Q5VUM1 108 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 TAF2Q6P1X5 1199 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 ATG14Q6ZNE5 492 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 TAC4Q86UU9 113 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 ACVR1CQ8NER5 493 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 ZIC5Q96T25 663 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 RTP3Q9BQQ7 232 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 NMRK2Q9NPI5 230 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 PNPOQ9NVS9 261 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 TMEM216Q9P0N5 145 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 EMCNQ9ULC0 261 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 PADI3Q9ULW8 664 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 RPL26L1Q9UNX3 145 aaKnown RBP13.41□□□□□ -0.26
CTNS-201ENST00000046640 MAGEA13PA6NCF6 341 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 MOCS2O96007 188 aaPredicted RBP13.41□□□□□ -0.26
CTNS-201ENST00000046640 FESP07332 822 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 CCNFP41002 786 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 CACNB2Q08289 660 aaPredicted RBP13.41□□□□□ -0.26
CTNS-201ENST00000046640 NIPAL4Q0D2K0 466 aa13.41□□□□□ -0.26
CTNS-201ENST00000046640 PAFAH1B3Q15102 231 aaKnown RBP13.41□□□□□ -0.26
CTNS-201ENST00000046640 TCHHL1Q5QJ38 904 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms