RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 FAM149B1Q96BN6 582 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 RCN3Q96D15 328 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 PRICKLE1Q96MT3 831 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 CATSPER2Q96P56 530 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 GATA5Q9BWX5 397 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 SLC4A5Q9BY07 1137 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 NUF2Q9BZD4 464 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 VPS33BQ9H267 617 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 ZNF408Q9H9D4 720 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 PRMT7Q9NVM4 692 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 NDUFA13Q9P0J0 144 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 C6orf203Q9P0P8 240 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 TUBGCP4Q9UGJ1 667 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 ZNF711Q9Y462 761 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 STX16-NPEPL1H3BU86 382 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 LSM1O15116 133 aaKnown RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 ATP9BO43861 1147 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 TRIM13O60858 407 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 FBXO21O94952 628 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 ASLP04424 464 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 PGK2P07205 417 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 PDGFRBP09619 1106 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 SPRP35270 261 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 HSP90AA5PQ58FG0 334 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 TMEM198Q66K66 360 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 BNC2Q6ZN30 1099 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 TP53INP2Q8IXH6 220 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 BHLHE22Q8NFJ8 381 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 NDRG1Q92597 394 aaKnown RBP10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 C12orf42Q96LP6 360 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 CPNE1Q99829 537 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 KIAA1257Q9ULG3 409 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 AKT3Q9Y243 479 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 HES2Q9Y543 173 aa10.74□□□□□ -0.69
CX3CL1-201ENST00000006053 PHIPQ8WWQ0 1821 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 KPNA7A9QM74 516 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 PPEF2O14830 753 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 VILLO15195 856 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 PIM1P11309 404 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 PRDX6P30041 224 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 SERPINB8P50452 374 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 SH3BGRP55822 239 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 TNFAIP2Q03169 654 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 LSM12Q3MHD2 195 aaKnown RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 GRTP1Q5TC63 336 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 FSTL4Q6MZW2 842 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 KLHDC10Q6PID8 442 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 C16orf89Q6UX73 402 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 MARVELD2Q8N4S9 558 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 METTL25Q8N6Q8 603 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 ZBTB8BQ8NAP8 495 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 SLC35F5Q8WV83 523 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 FERMT1Q9BQL6 677 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 ILKAPQ9H0C8 392 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 BRD8Q9H0E9 1235 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 PDZD7Q9H5P4 517 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 ASB7Q9H672 318 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 GNEQ9Y223 722 aaKnown RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 TMEM98Q9Y2Y6 226 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 RGSL1A5PLK6 1076 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 VTNP04004 478 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 CCDC130P13994 396 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 ARF4P18085 180 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 ACAT1P24752 427 aaKnown RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 GLRBP48167 497 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 GMPSP49915 693 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 ART3Q13508 389 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 CYLC2Q14093 348 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 FAM156AQ8NDB6 213 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 TMA16Q96EY4 203 aaKnown RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 SCYL1Q96KG9 808 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 APOL2Q9BQE5 337 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 R3HDMLQ9H3Y0 253 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 DPEP3Q9H4B8 488 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 PRDM12Q9H4Q4 367 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 VRTNQ9H8Y1 702 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 NMRAL1Q9HBL8 299 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 KLHL8Q9P2G9 620 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 WDR37Q9Y2I8 494 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 G3V2L1 256 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 PENKP01210 267 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 C2P06681 752 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 MCF2P10911 925 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 MS4A2Q01362 244 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 ADGRE1Q14246 886 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 CYTH1Q15438 398 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 B3GNT6Q6ZMB0 384 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 NCCRP1Q6ZVX7 275 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 ZNF567Q8N184 647 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 LENG1Q96BZ8 264 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 RBBP8Q99708 897 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 CXCL16Q9H2A7 254 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 TASP1Q9H6P5 420 aa10.73□□□□□ -0.69
CX3CL1-201ENST00000006053 TK2O00142 265 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 DENRO43583 198 aaKnown RBP10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 PIGNO95427 931 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 TGFB3P10600 412 aa10.72□□□□□ -0.69
CX3CL1-201ENST00000006053 NAB1Q13506 487 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms