RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Smoc1Q8BLY1 463 aaKnown RBP20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Appl1Q8K3H0 707 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Slc5a9Q8VDT1 685 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 FdpsQ920E5 353 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Tubb2bQ9CWF2 445 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Fut8Q9WTS2 575 aa20.39■□□□□ 0.86
Lig3-204ENSMUST00000131537 Vmn2r88L7N1W8 857 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gna12P27600 379 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 GsrP47791 500 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Eif3eP60229 445 aaKnown RBP20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Mrpl10Q3TBW2 262 aaKnown RBP20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Ermp1Q3UVK0 898 aaKnown RBP20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Tmem255bQ5FW56 369 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Taar7aQ5QD12 358 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Prmt8Q6PAK3 394 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Trim6Q8BGE7 488 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 CcnyQ8BGU5 341 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Slc43a1Q8BSM7 564 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Trerf1Q8BXJ2 1205 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Ccdc137Q8R0K4 290 aaKnown RBP20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Rec114Q9CWH4 259 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Rnf135Q9CWS1 417 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Slc25a19Q9DAM5 318 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Vwa7Q9JHA8 891 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Magel2Q9QZ04 1284 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 HephQ9Z0Z4 1157 aa20.39■□□□□ 0.85
Lig3-204ENSMUST00000131537 Fam171a1A2ATK9 892 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gm13285B1AYI3 182 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gm13275B1AYI8 182 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Srsf11E9Q6E5 511 aaKnown RBP20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Speer2E9Q9U2 264 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gja4P28235 333 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 CskP41241 450 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Il12aP43431 215 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Ndst2P52850 883 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Sycp3P70281 254 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Msx3P70354 204 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Bcl2a1cQ0P538 128 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 GsapQ3TCV3 858 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gm853Q3UNZ2 425 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Fam8a1Q3URQ4 399 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Lipo3Q3UT41 399 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Nxpe4Q52KP5 543 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Bcas1Q80YN3 633 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Kctd13Q8BGV7 329 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Zfp719Q8BIV1 735 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 IfnzQ8BQT1 182 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gm13278Q8CD73 182 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Fam228aQ8CDW1 299 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Atat1Q8K341 421 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Rbm42Q91V81 474 aaKnown RBP20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Cog2Q921L5 731 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Lrp8Q924X6 996 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Cpb2Q9JHH6 422 aa20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Cwc15Q9JHS9 229 aaKnown RBP20.38■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gm16430A6X8J1 155 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Scgb2b7D3YYY1 112 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Atf6F6VAN0 656 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Slc22a2O70577 553 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Tap1P21958 724 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 AmhP27106 555 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 SbdsP70122 250 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 IqcmQ149I8 489 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Sap25Q1EHW4 186 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Trmt10cQ3UFY8 414 aaKnown RBP20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Krt32Q62168 407 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Znf280cQ6P3Y5 742 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Trim17Q7TPM3 477 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Klhl7Q8BUL5 586 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 HgsQ99LI8 775 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Trem2Q99NH8 227 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Satl1Q9D5N8 744 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Diaph3Q9Z207 1171 aa20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 MylkQ6PDN3 1941 aaKnown RBP20.37■□□□□ 0.85
Lig3-204ENSMUST00000131537 Prrg1A2BFE8 218 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Vmn1r55E9Q8I6 310 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Ighmbp2P40694 993 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gdf5P43027 495 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gdpd4Q3TT99 632 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 FaxcQ3UMF9 409 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Ephx3Q3V1F8 367 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Tbc1d1Q60949 1255 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Krt12Q64291 487 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Ints6Q6PCM2 883 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Glra2Q7TNC8 452 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Cox14Q8BH51 57 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 4933402J07RikQ8BHX0 270 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Eif2aQ8BJW6 581 aaKnown RBP20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Zswim4Q8C7B8 1101 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Ccdc87Q8CDL9 855 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 FntbQ8K2I1 437 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Cacng3Q9JJV5 315 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Slc7a9Q9QXA6 487 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Slfn2Q9Z0I6 378 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Ror1Q9Z139 937 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Gm13283A0A087WPG5 182 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Fgf10O35565 209 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 SmoP56726 793 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Olfm3P63056 478 aa20.36■□□□□ 0.85
Lig3-204ENSMUST00000131537 Frg1P97376 258 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms