RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Gemin2Q9CQQ4 269 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Rpl34Q9D1R9 117 aaKnown RBP7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Spatc1lQ9D9W0 342 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Tsga13Q9DA17 273 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Pak1ip1Q9DCE5 382 aaKnown RBP7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Olfr711Q9EPG2 314 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Mkrn2Q9ERV1 416 aaKnown RBP7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Uts2Q9QZQ3 123 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Alpk2Q91ZB0 2144 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Fam171a2A2A699 822 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Cyp4a12bA2A974 508 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Sh3pxd2bA2AAY5 908 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Lcn6A2AJB9 181 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Rabgap1lA6H6A9 815 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Lonrf2B2RT44 518 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 4930558K02RikE0CXC6 182 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Cdc6O89033 562 aaKnown RBP7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Prf1P10820 554 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Hoxd8P23463 289 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Calb2Q08331 271 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 March5Q3KNM2 278 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Fnip1Q68FD7 1165 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Hbs1lQ69ZS7 682 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Smg5Q6ZPY2 1017 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 MroQ7TNB4 248 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Xylt1Q811B1 953 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 4933402J07RikQ8BHX0 270 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Znf473Q8BI67 892 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Nup54Q8BTS4 510 aaKnown RBP7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Amz1Q8BVF9 502 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Lrrc19Q8BZT5 364 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 TbceQ8CIV8 524 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Katnal1Q8K0T4 488 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Cyp4a12aQ91WL5 508 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Pcdhb19Q91Y01 801 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Lpgat1Q91YX5 370 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Trmt11Q9CWH5 460 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Ssu72Q9CY97 194 aaKnown RBP7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Spc24Q9D083 201 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Polr3hQ9D2C6 204 aaKnown RBP7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 4933428M09RikQ9D3X3 192 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Q9D454 513 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Il17rbQ9JIP3 499 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Plod1Q9R0E2 728 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Atp6v1g2Q9WTT4 118 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Plxna3P70208 1872 aa7.73□□□□□ -1.17
Trim40-201ENSMUST00000087158 Tnfrsf14A0A1W2P7D5 276 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Ccdc8D3YZV8 685 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Gm5415E9PXF3 478 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Spata31E9QAF0 1014 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Vmn2r88L7N1W8 857 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Rpl21O09167 160 aaKnown RBP7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Btg4O70552 250 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Hsd17b7O88736 334 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Lsp1P19973 330 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 ZfaP23607 742 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Cd247P24161 164 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Sdr16c6Q05A13 316 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Fut7Q11131 389 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Zbtb48Q1H9T6 681 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Fam8a1Q3URQ4 399 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Mvb12bQ6KAU4 317 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Gpbp1l1Q6NZP2 473 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Adat2Q6P6J0 191 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Shkbp1Q6P7W2 704 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Znf821Q6PD05 413 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Zfp512bQ6PHP4 879 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Abcg2Q7TMS5 657 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Chn2Q80XD1 332 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Fam205cQ80YD3 371 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Kctd13Q8BGV7 329 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Znf76Q8BMU0 568 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Rd3Q8BRE0 195 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Usp43Q8BUM9 1132 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 GancQ8BVW0 898 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Samd3Q8C4H2 520 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Zfp449Q8CB76 518 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 NaprtQ8CC86 538 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 PvrQ8K094 408 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Glis1Q8K1M4 789 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Zbtb44Q8R0A2 453 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Igsf8Q8R366 611 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Caap1Q8VDY9 356 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Olfr348Q8VGK3 313 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Barhl2Q8VIB5 384 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 B3galt6Q91Z92 325 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Reep3Q99KK1 254 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Sytl2Q99N50 950 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Atad1Q9D5T0 361 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Rin2Q9D684 903 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Oser1Q9D722 291 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Gucy1a3Q9ERL9 691 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Ddx21Q9JIK5 851 aaKnown RBP7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Neu2Q9JMH3 379 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Wdr54Q9R0D8 334 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Coro1cQ9WUM4 474 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Smarcb1Q9Z0H3 385 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 PtprfA2A8L5 1898 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Kiaa0100Q5SYL3 2234 aa7.72□□□□□ -1.17
Trim40-201ENSMUST00000087158 Btnl4A2CG29 586 aa7.72□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms