RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 CcniQ9Z2V9 377 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Fam155bA2BDP1 471 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Ssxb8B1AY40 170 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm17555F6U8B9 371 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Vmn2r39L7N2E5 861 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 AvilO88398 819 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 BpgmP15327 259 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 RarbP22605 482 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gcnt1Q09324 428 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Zfp868Q3UTQ6 422 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Itm2aQ61500 263 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Wdr45bQ9CR39 344 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Il21Q9ES17 146 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 NfkbizQ9EST8 728 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gdf11Q9Z1W4 405 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Pdcd11Q6NS46 1862 aaKnown RBP16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm42688A0A0R3P9D1 673 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Vmn2r50E9PW61 861 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Zfp780bE9Q2S6 806 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 MaffO54791 156 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Mxd1P50538 227 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 LipeP54310 759 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Cpsf4Q8BQZ5 211 aaKnown RBP16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 4931406P16RikQ8C5X1 1059 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Defb15Q8R2I5 79 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Q9D4W2 315 aa16.69■□□□□ 0.26
Col17a1-202ENSMUST00000086923 4930444G20RikD3Z741 495 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Ntrk1Q3UFB7 799 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Stxbp2Q64324 593 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Lrrc27Q80YS5 523 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 4921511C20RikQ8BVT7 469 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Q99KU6 348 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Padi4Q9Z183 666 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Kcnma1Q08460 1209 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Carns1Q6ZPS2 827 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Q8BGN9 141 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Pcdhb1Q91Y08 818 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Cyp2s1Q9DBX6 501 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gpr63Q9EQQ3 425 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Snap29Q9ERB0 260 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm35911A0A1D5RLS7 214 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 P2rx3Q3UR32 397 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Thnsl1Q8BH55 747 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Phka2Q8BWJ3 1235 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Fate1Q8CEK7 99 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Mcoln3Q8R4F0 553 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Hnrnph3D3Z3N4 346 aaKnown RBP16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Prl2c2P04095 224 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 rp9P97762 213 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Dnajc11Q5U458 559 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Med22Q62276 200 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Zdhhc24Q6IR37 284 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Ggnbp1Q6K1E7 370 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 HpseQ6YGZ1 535 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Syt16Q7TN83 639 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm4922Q8C0N0 497 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 PiguQ8K358 434 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Acat1Q8QZT1 424 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Ssxb1Q9CPU1 170 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Clec4aQ9QZ15 238 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Fem1bQ9Z2G0 627 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Robo2Q7TPD3 1470 aa16.68■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm29276A0A087WNW5 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm21117A0A087WPJ9 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm20820A0A087WPP3 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm20937A0A087WQA3 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm21258A0A087WQC7 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm28102A0A087WQL3 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm21095A0A087WR14 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm20792A0A087WRF5 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm21865A0A087WRL2 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm28576A0A087WRP6 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm28490A0A087WRT9 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm21294A0A087WS79 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm20824A0A087WS97 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm21996A0A087WSS9 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm28870A0A0A6YW38 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm29866A0A0A6YX04 222 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Tceal7A3KGA4 98 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 2610028H24RikG5E8K1 270 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gas2P11862 314 aaKnown RBP16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gpatch4Q3TFK5 415 aaKnown RBP16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Q3UST5 385 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Glra2Q7TNC8 452 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Gm21627Q810R0 219 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Tcaf2Q921K8 919 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 PmpcbQ9CXT8 489 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Taf1dQ9D4V4 322 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Kif14L0N7N1 1674 aaKnown RBP16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Glyatl3E9Q5L8 290 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Stk16O88697 305 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 AlplP09242 524 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Fcer2P20693 331 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 DcnP28654 354 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Usp39Q3TIX9 564 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Rnf139Q7TMV1 668 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Elmo3Q8BYZ7 720 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Cdc73Q8JZM7 531 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Olfr1090Q8VGA6 313 aa16.67■□□□□ 0.26
Col17a1-202ENSMUST00000086923 Hmgn3Q9DCB1 99 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms