RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Cbfa2t3O54972 620 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 MatkP41242 505 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Atp6v1b2P62814 511 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Lypla1P97823 230 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Nlrc4Q3UP24 1024 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Vps72Q62481 368 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Klhl14Q69ZK5 630 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Abhd10Q6PE15 297 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Chst10Q6PGK7 356 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Clec4b1Q7TS58 209 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Senp7Q8BUH8 1037 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Q8BZE1 841 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Tlk1Q8C0V0 766 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Pi4k2bQ8CBQ5 469 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Cnot6Q8K3P5 557 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Irak3Q8K4B2 609 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Tpgs1Q99MS8 303 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 GrapQ9CX99 217 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Mageb3Q9D2H4 330 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 MlklQ9D2Y4 472 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Vps35Q9EQH3 796 aaKnown RBP8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ddx21Q9JIK5 851 aaKnown RBP8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Trpm5Q9JJH7 1158 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Psmd13Q9WVJ2 376 aa8.44□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Prss51A0A286YDY8 319 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 UprtB1AVZ0 310 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gm11397F6V5V4 377 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gm5145F8VQ88 278 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Rad51ap2G3UW63 976 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 DcxO88809 366 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Cd2P08920 344 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Scg3P47867 471 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Fbp2P70695 339 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Col9a2Q07643 688 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 HexdcQ3U4H6 486 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 9930111J21Rik1Q5SVP0 844 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 CttnQ60598 546 aaKnown RBP8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Fcrl5Q68SN8 596 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Znf618Q80YY7 953 aaKnown RBP8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Cgrrf1Q8BMJ7 332 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Serpina3bQ8BYY9 420 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Lurap1lQ8K2P1 221 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 ClyblQ8R4N0 338 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Serpinb9gQ8VHQ1 377 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Cdca7Q9D0M2 382 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Plin3Q9DBG5 437 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 PorcnQ9JJJ7 461 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Dnaja2Q9QYJ0 412 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Pex14Q9R0A0 376 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 RecqlQ9Z129 648 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Sbf2E9PXF8 1872 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ms4a14A0A087WSD2 1232 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gm3173A6NAS3 172 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ism2D3Z6A3 493 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gm3020E9Q3J7 150 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Cyp4a31F8WGU9 509 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gm2897K7N6T7 172 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gm3488M0QW81 238 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 SfnO70456 248 aaKnown RBP8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Hspa1bP17879 642 aaKnown RBP8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Actr2P61161 394 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Msx3P70354 204 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Mrgprx2Q3UG50 352 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Q3UK37 420 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Pld5Q3UNN8 536 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Akap14Q3V0I7 536 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Hspa1aQ61696 641 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Stxbp2Q64324 593 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 RgnQ64374 299 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Nrg1Q6DR99 700 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Fam102aQ78T81 392 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 PrcpQ7TMR0 491 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Olfr670Q7TRP3 312 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 RimklbQ80WS1 387 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ppm1lQ8BHN0 360 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gm3411Q8C7R2 150 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Agbl2Q8CDK2 862 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Unc45bQ8CGY6 931 aaKnown RBP8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Trim32Q8CH72 655 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Mul1Q8VCM5 352 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Wrnip1Q91XU0 660 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Tdrd1Q99MV1 1172 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gtf2ird2Q99NI3 936 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 AadacQ99PG0 398 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Lrrc18Q9CQ07 262 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Pole4Q9CQ36 118 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Castor1Q9CWQ8 331 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 MispQ9D279 648 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Fam227bQ9D518 532 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Clic3Q9D7P7 237 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 EtfbQ9DCW4 255 aaKnown RBP8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Magel2Q9QZ04 1284 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Rbck1Q9WUB0 508 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Coro1bQ9WUM3 484 aaKnown RBP8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Gm7682A0A0J9YUM1 481 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Pgap3A2A559 320 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Ccnyl1D3YUJ3 367 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Kcng2F7A6P6 480 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Mroh4G3X8W1 983 aa8.43□□□□□ -1.06
Cdc40-201ENSMUST00000044166 Zc3h12bG3X9I7 835 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms