RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Timm13P62075 95 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Krt26Q3TRJ4 462 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Scaf4Q6PFF0 1209 aaKnown RBP17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Kank2Q8BX02 843 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 CherpQ8CGZ0 936 aaKnown RBP17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Grk2Q99MK8 689 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Acot13Q9CQR4 140 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Top3bQ9Z321 862 aaKnown RBP17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Nup205A0A0J9YUD5 2061 aaKnown RBP17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Znf106O88466 1888 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Tnk2O54967 1055 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Mup5P11591 180 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 PrkcdP28867 674 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Slc11a2P49282 568 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Usp46P62069 366 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Olfr464Q5SW48 313 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Pabpn1lQ5XFR0 273 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 ScapQ6GQT6 1276 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Klhdc10Q6PAR0 439 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Rasa4Q6PFQ7 802 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 DstykQ6XUX1 927 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Cand2Q6ZQ73 1235 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Acap2Q6ZQK5 770 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Cyth4Q80YW0 393 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Znf426Q8R1D1 550 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Dlgap1Q9D415 992 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Sf3b1Q99NB9 1304 aaKnown RBP17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Shroom3Q9QXN0 1986 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Gm5160F8VPN3 147 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Klf6O08584 283 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Sbk3P0C5K0 361 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 FerP70451 823 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Serpina5P70458 405 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Fam35aQ3UEN2 891 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 B020004J07RikQ3UTC0 476 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Chi3l1Q61362 389 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Wee2Q66JT0 555 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 RbfaQ6P3B9 350 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Fam163bQ8BUM6 167 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 4921504E06RikQ8CET2 560 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Rps6kl1Q8R2S1 544 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Tbrg4Q91YM4 630 aaKnown RBP17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 DeraQ91YP3 318 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Tfap2dQ91ZK0 452 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Tmem68Q9D850 329 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Ddx21Q9JIK5 851 aaKnown RBP17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 NumbQ9QZS3 653 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Slfn2Q9Z0I6 378 aa17.22■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Krt28A6BLY7 462 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 PgfP49764 158 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Togaram2Q3TYG6 1002 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Slc22a16Q497L8 649 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Arhgap20Q6IFT4 1182 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Tas2r129Q7M709 320 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Ldhal6bQ8BVP2 382 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 TbcdQ8BYA0 1196 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Tspan33Q8R3S2 283 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Snx15Q91WE1 337 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Sh3d19Q91X43 789 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Serbp1Q9CY58 407 aaKnown RBP17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 MycsQ9Z304 431 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Cyp4a12bA2A974 508 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Aldoart1A6ZI46 419 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Gm7942L7N277 499 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 NumblO08919 604 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Myl4P09541 193 aaKnown RBP17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Caprin2Q05A80 1031 aaKnown RBP17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Cyp2c66Q5GLZ0 490 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Grik1Q60934 836 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Mxd4Q60948 209 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Usp17laQ61068 526 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 PtprrQ62132 656 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Stx3Q64704 289 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Ino80dQ66JY2 873 aaKnown RBP17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 NcaphQ8C156 731 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Hmgcll1Q8JZS7 343 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Cyp4a12aQ91WL5 508 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Trim7Q923T7 510 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Gemin2Q9CQQ4 269 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Tpd52l2Q9CYZ2 220 aaKnown RBP17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Atad1Q9D5T0 361 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Leng1Q9DB98 261 aa17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Maged1Q9QYH6 775 aaKnown RBP17.21■□□□□ 0.35
Sec61a1-201ENSMUST00000032168 Ms4a4aA0A087WRT7 236 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Vmn2r27D3YUK6 857 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Hes2O54792 157 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 ChrngP04760 519 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Gnrh1P13562 90 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Ranbp9P69566 653 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 P3h1Q3V1T4 739 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Kctd8Q50H33 476 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Crtc1Q68ED7 630 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Spata7Q80VP2 582 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Ticam2Q8BJQ4 232 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Cgrrf1Q8BMJ7 332 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Rd3Q8BRE0 195 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Cwf19l1Q8CI33 537 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Ppp6r2Q8R3Q2 923 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Actrt2Q9D9L5 377 aa17.2■□□□□ 0.34
Sec61a1-201ENSMUST00000032168 Nphs1Q9QZS7 1256 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms