RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Sh3d19Q91X43 789 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Pcdhb13Q91Y06 796 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Rev1Q920Q2 1249 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Dhrs1Q99L04 313 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Chmp2aQ9DB34 222 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Rasgrp2Q9QUG9 608 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Speer3W4VSP1 261 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 MipepA6H611 711 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Olfr310B2RVZ1 332 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Vmn2r70K7N702 854 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Klf6O08584 283 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Pik3r2O08908 722 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gdf7P43029 461 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Abce1P61222 599 aaKnown RBP12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cdk7Q03147 346 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ampd1Q3V1D3 745 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Als2clQ60I26 952 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Arl13bQ640N2 427 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 RbfaQ6P3B9 350 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tatdn1Q6P8M1 295 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Deup1Q7M6Y5 601 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Best2Q8BGM5 508 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Rcn2Q8BP92 320 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Abraxas1Q8BPZ8 407 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ston2Q8BZ60 895 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Castor2Q8CAB8 329 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Traf3ip2Q8N7N6 555 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 NeproQ8R2U2 564 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Q9D4A5 307 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Agpat3Q9D517 376 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Atp6v1g2Q9WTT4 118 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Atp6v1c1Q9Z1G3 382 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Prr14lE9Q7C4 1971 aa12.97□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Arrdc4A0A0B4J1F4 415 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Rnf19bA2A7Q9 732 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cyp2a22B2RXZ2 492 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cdr1E9Q0B4 517 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm20721E9Q2U8 318 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 CidebO70303 219 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Atxn10P28658 475 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Anxa5P48036 319 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Dact3Q0PHV7 610 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Avpr1aQ62463 423 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 DbhQ64237 622 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 DrgxQ8BYH0 263 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ttc39bQ8BYY4 617 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ago3Q8CJF9 860 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 PvrQ8K094 408 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Rpl34Q9D1R9 117 aaKnown RBP12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Serpinb9bQ9DAV6 377 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 RalbQ9JIW9 206 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 PigqQ9QYT7 581 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Zbtb12Q9Z150 459 aa12.96□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Psma3O70435 255 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 M6prP24668 278 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Htr2cP34968 459 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Kir3dl1P83555 432 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Itga4Q00651 1039 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Caprin2Q05A80 1031 aaKnown RBP12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 1700061G19RikQ08EE8 705 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gpr15Q0VDU3 360 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tmem151aQ6GQT5 468 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ip6k1Q6PD10 433 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Zbtb41Q811F1 908 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Plin5Q8BVZ1 463 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Lin7aQ8JZS0 233 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Cybrd1Q925G2 290 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mat2bQ99LB6 334 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Q9D979 236 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Lima1Q9ERG0 753 aaKnown RBP12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Asah2Q9JHE3 756 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Syt5Q9R0N5 386 aa12.96□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tcp11x2A2AEI7 503 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gm12800B1AUV4 484 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Gm12794L7MTS5 483 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Galnt4O08832 578 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Exoc7O35250 697 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Chil3O35744 398 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Sbk3P0C5K0 361 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Cd72P21855 354 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ccna2P51943 422 aaKnown RBP12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Atxn7l3bQ3UD01 97 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Fam91a1Q3UVG3 837 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Slc17a6Q8BLE7 582 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Tmem209Q8BRG8 561 aaKnown RBP12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Zfp398Q8BV16 643 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Clptm1lQ8BXA5 539 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Mccc1Q99MR8 717 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Acot13Q9CQR4 140 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Abhd1Q9QZC8 412 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 4931406B18RikA2RSL7 367 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Ccdc8D3YZV8 685 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Taf4E9QAP7 1042 aaKnown RBP12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 H2-Eb1P04230 264 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 SagP20443 403 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Nxpe4Q52KP5 543 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Olfr8Q60892 310 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Olfr867Q7TRF3 331 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Trpa1Q8BLA8 1125 aa12.95□□□□□ -0.34
Rnf4-201ENSMUST00000030992 Naa25Q8BWZ3 972 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms