RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Trpm4Q7TN37 1213 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Clec2eQ80XD9 204 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Zfp189Q8BKP2 608 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Slc38a7Q8BWH0 463 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Cnot6Q8K3P5 557 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Rnh1Q91VI7 456 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Elp2Q91WG4 831 aaKnown RBP11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Sh3d19Q91X43 789 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Q91Z58 1206 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 CygbQ9CX80 190 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Snx7Q9CY18 387 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 4930513O06RikQ9D549 161 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 EhhadhQ9DBM2 718 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Plscr3Q9JIZ9 296 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Pramef20B1ARV6 477 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Smpd5D6MZJ6 483 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Anxa8O35640 327 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 En1P09065 401 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Grik2P39087 908 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Dlx2P40764 332 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Lrpap1P55302 360 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Ranbp9P69566 653 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Hdac2P70288 488 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Grid2ipQ0QWG9 1203 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Nlrp1aQ2LKU9 1182 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Xlr4cQ3TKR2 215 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 PapolgQ6PCL9 739 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Mis18bp1Q80WQ8 998 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 BicralQ8CHH5 1074 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Coq9Q8K1Z0 313 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Apobec3Q99J72 440 aaKnown RBP11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Abcg3Q99P81 650 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Trim16Q99PP9 556 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Tmbim6Q9D2C7 237 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Uba7Q9DBK7 977 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Pold3Q9EQ28 462 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Xlr4bQ9JJQ7 215 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Dnajb2Q9QYI5 324 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Suclg2Q9Z2I8 433 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Osbpl10S4R1M9 766 aa11.74□□□□□ -0.53
Trim55-201ENSMUST00000029139 Igf2rQ07113 2483 aaKnown RBP11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Gm42688A0A0R3P9D1 673 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Stpg3A2RSX4 306 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Vwa5b1A9Z1V5 1215 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Gm572B1ARY8 399 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Lrrc31F6VYM1 502 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Rnpepl1G5E872 720 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Rgs7O54829 469 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 NfkbieO54910 364 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 CcnkO88874 554 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 InvsO89019 1062 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Krt4P07744 525 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Msh3P13705 1091 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Ptpn1P35821 432 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 CtscP97821 462 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Muc3aQ3U5A2 218 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Gja6Q6S5G4 283 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Rpl10Q6ZWV3 214 aaKnown RBP11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 FukQ7TMC8 1090 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Q8BWQ6 963 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Mfsd6Q8CBH5 775 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Sirt5Q8K2C6 310 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Spag16Q8K450 639 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Ppp6r2Q8R3Q2 923 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Mcoln3Q8R4F0 553 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Mgat5Q8R4G6 740 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 TrirQ9D735 173 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Pnp2Q9D8C9 305 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 1700080O16RikQ9D9G4 284 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Ampd2Q9DBT5 798 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Ddx21Q9JIK5 851 aaKnown RBP11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 AadatQ9WVM8 425 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Cd300ld4A2A7W1 245 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Kpna7C0LLJ0 499 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 F830016B08RikG3UWE2 416 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Sema3aO08665 772 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Myl3P09542 204 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Ass1P16460 412 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Nedd8P29595 81 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Frg1P97376 258 aaKnown RBP11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Pstpip1P97814 415 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Secisbp2Q3U1C4 858 aaKnown RBP11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Pik3r6Q3U6Q4 756 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Six1Q62231 284 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Q6P2K3 674 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 SepsecsQ6P6M7 504 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Cd300ld3Q6SJQ5 245 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Ssxb10Q6XAR7 170 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Slc9a7Q8BLV3 726 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Mrpl48Q8JZS9 211 aaKnown RBP11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Lnx2Q91XL2 687 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 OptcQ920A0 328 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Ak5Q920P5 562 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Tor1bQ9ER41 336 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Tmem8aQ9ESN3 769 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 DiabloQ9JIQ3 237 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Dach1Q9QYB2 751 aa11.73□□□□□ -0.53
Trim55-201ENSMUST00000029139 Igsf9bE9PZ19 1328 aa11.72□□□□□ -0.53
Trim55-201ENSMUST00000029139 Gm11756A2BEJ1 356 aa11.72□□□□□ -0.53
Trim55-201ENSMUST00000029139 Ace3D0G895 737 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms