RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Rad51ap2G3UW63 976 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 E230025N22RikG5E8S3 482 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 AvilO88398 819 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Adcy1O88444 1118 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Akap10O88845 662 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Ap2a1P17426 977 aaKnown RBP18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 RalgdsQ03385 852 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Aarsd1Q3THG9 412 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Armcx2Q6A058 784 aaKnown RBP18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Tigd3Q7TM95 470 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 HomezQ80W88 542 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Dnajb13Q80Y75 316 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Usp43Q8BUM9 1132 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Fubp1Q91WJ8 651 aaKnown RBP18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Grm3Q9QYS2 879 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Wnt8bQ9WUD6 350 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Tmigd3G3X8R9 209 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Rdh7O88451 316 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 TnfP06804 235 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Krt6aP50446 553 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Gabrb3P63080 473 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Ikzf1Q03267 517 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Asprv1Q09PK2 339 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Olfr464Q5SW48 313 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 PtprrQ62132 656 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Olfr212Q7TS33 327 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Fra10ac1Q8BP78 315 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Zfp398Q8BV16 643 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Trim35Q8C006 501 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Pde10aQ8CA95 790 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Zmiz2Q8CIE2 920 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Smg8Q8VE18 991 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Fam114a2Q8VE88 497 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Pth2rQ91V95 546 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Pcdhb13Q91Y06 796 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Agpat3Q9D517 376 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Clic3Q9D7P7 237 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Rtl9Q32KG4 1339 aa18.75■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Mkrn2osD3Z393 217 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 AmacrO09174 381 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Chrna4O70174 629 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Klc2O88448 599 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Mc4rP56450 332 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Caprin2Q05A80 1031 aaKnown RBP18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Galnt5Q8C102 930 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Panx3Q8CEG0 392 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Otud7aQ8R554 926 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Slc22a19Q8VCA0 551 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Plbd1Q8VCI0 550 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Sorcs3Q8VI51 1219 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Sntg2Q925E0 539 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 NamptQ99KQ4 491 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Mgrn1Q9D074 532 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Doc2gQ9ESN1 387 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Timp4Q9JHB3 224 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 4930426L09RikE9Q0N7 123 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Tmem207P86045 143 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Fam35aQ3UEN2 891 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 LppQ8BFW7 613 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 EmsyQ8BMB0 1264 aaKnown RBP18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 CntrobQ8CB62 887 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Olfr30Q8VGD8 315 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Syde1Q9DBZ9 737 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Tle2Q9WVB2 767 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Rpl9-ps1S4R1R7 191 aa18.74■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Vmn2r96E9PZU5 664 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 BC024978J3QPC3 361 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Vmn2r70K7N702 854 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Il2P04351 169 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Tsta3P23591 321 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Mxd1P50538 227 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 PapolaQ61183 739 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Abcd2Q61285 741 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Jade1Q6ZPI0 834 aaKnown RBP18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Adam32Q8K410 754 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Sh3kbp1Q8R550 709 aaKnown RBP18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Adam19O35674 920 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Hsd17b7O88736 334 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Atp6v0d1P51863 351 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Nploc4P60670 608 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Eml1Q05BC3 814 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Mettl17Q3U2U7 461 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Pcnx4Q3UVY5 1174 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Tmem237Q3V0J1 427 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Snx17Q8BVL3 470 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 PigwQ8C398 503 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 HpdlQ8K248 371 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Rps6kl1Q8R2S1 544 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Slc25a3Q8VEM8 357 aaKnown RBP18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Adcy4Q91WF3 1077 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Creld1Q91XD7 420 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Mtif2Q91YJ5 727 aaKnown RBP18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Elp3Q9CZX0 547 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Kctd4Q9D7X1 259 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Cyp4v2Q9DBW0 525 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Dpp7Q9ET22 506 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Morc1Q9WVL5 950 aa18.73■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Vmn2r121A2BE32 847 aa18.72■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Prl3b1P09586 222 aa18.72■□□□□ 0.59
Ccdc3-201ENSMUST00000027988 Prim2P33610 505 aa18.72■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms