RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 St7Q99M96 577 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Slc25a11Q9CR62 314 aaKnown RBP12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 MtrexQ9CZU3 1040 aaKnown RBP12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Hormad1Q9D5T7 392 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Prl2a1Q9JHK0 228 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Acox2Q9QXD1 681 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Cdh13Q9WTR5 714 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Ces1bD3Z5G7 567 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Gjb1P28230 283 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Hsdl2Q2TPA8 490 aaKnown RBP12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Thrap3Q569Z6 951 aaKnown RBP12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Lcp1Q61233 627 aaKnown RBP12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Tll1Q62381 1013 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Dna2Q6ZQJ5 1062 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Il17reQ8BH06 637 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Lrrc19Q8BZT5 364 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Ifi205aQ8CGE8 404 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Rwdd4Q9CPR1 188 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Hnrnpa0Q9CX86 305 aaKnown RBP12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Lrrc17Q9CXD9 443 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Subh2bvQ9D9Z7 123 aa12.9□□□□□ -0.34
Msh6-201ENSMUST00000005503 Gm3752A6NAT4 150 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 A530032D15RikE9Q422 215 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Gm6408J3QNG1 320 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Hs3st1O35310 311 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 CcnoP0C242 352 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Pex2P55098 305 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 KizQ3UXL4 695 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Akap14Q3V0I7 536 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Trpc1Q61056 793 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Cd37Q61470 281 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Mib1Q80SY4 1006 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Pnma2Q8BHK0 365 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Irak3Q8K4B2 609 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Mul1Q8VCM5 352 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Zcchc18Q8VD24 393 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Q9CQC3 228 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Pbld2Q9CXN7 288 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Ttc30bQ9CY00 664 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Zfp655Q9CZP3 541 aaKnown RBP12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Noxred1Q9D3S5 366 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Tmem79Q9D709 391 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Rnft1Q9DCN7 395 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Bclaf3A2AG58 752 aaKnown RBP12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Cyp2c69E9PXC3 491 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 XntrpcF8VQM8 1264 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 DldO08749 509 aaKnown RBP12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Apoa4P06728 395 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Phka1P18826 1241 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Cyp2c40P56657 491 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 B3gat3P58158 335 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Pcsk1P63239 753 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Nat9Q3UG98 241 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Fam83fQ3UKU4 495 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Mapkap1Q8BKH7 522 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Gtf3c4Q8BMQ2 817 aaKnown RBP12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Rec114Q9CWH4 259 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Elp3Q9CZX0 547 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Tjap1Q9DCD5 539 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 IcmtQ9EQK7 283 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Igdcc4Q9EQS9 1252 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 H2afyQ9QZQ8 372 aaKnown RBP12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Spata31d1aE9QA35 1336 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Myh11O08638 1972 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Bcl9lQ67FY2 1494 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Gbp11A9YVJ5 442 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Celf5D3Z4T1 395 aaKnown RBP12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Ercc2O08811 760 aaKnown RBP12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Hsd17b7O88736 334 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Fmo3P97501 534 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Palm2Q8BR92 376 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Nudt13Q8JZU0 352 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Mtg1Q8R2R6 326 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Cox18Q8VC74 331 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Nt5c1bQ91YE9 573 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Mta3Q924K8 591 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Zmat2Q9CPW7 199 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Ssu72Q9CY97 194 aaKnown RBP12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Dus2Q9D7B1 493 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 Ampd2Q9DBT5 798 aa12.89□□□□□ -0.35
Msh6-201ENSMUST00000005503 4921501E09RikA0A0R4J054 908 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 MipepA6H611 711 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 D3Z070 196 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Gm4302E9PX25 294 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Stra6O70491 670 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Fgfr1P16092 822 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Hk1P17710 974 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Slc11a2P49282 568 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 GckP52792 465 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Dlg3P70175 849 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Afg1lQ3V384 480 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Smpd4Q6ZPR5 823 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Amz1Q8BVF9 502 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Plin5Q8BVZ1 463 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 CarfQ8VHI4 689 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 BsndQ8VIM4 307 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Ndc80Q9D0F1 642 aaKnown RBP12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Zbtb11G5E8B9 1050 aaKnown RBP12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Gm3248K7N721 186 aa12.88□□□□□ -0.35
Msh6-201ENSMUST00000005503 Aqp4P55088 323 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms