RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gm7145A0A087WS64 360 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Serpinb9cI7HJI5 387 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AurkbO70126 345 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rdh7O88451 316 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hsd17b7O88736 334 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Il13ra2O88786 383 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mtco1P00397 514 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gstm5P48774 224 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hsd17b1P51656 344 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Itga11P61622 1188 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Copz1P61924 177 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fam83eQ80XS7 481 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Q810S2 196 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Stk32aQ8BGW6 398 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Prl7b1Q8CGZ9 251 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr695Q8VFM3 315 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Lrrc71Q9D3W5 558 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Efcab9Q9DAM2 216 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ssr3Q9DCF9 185 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Setd1aE9PYH6 1716 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Adgrb3Q80ZF8 1522 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ccdc8D3YZV8 685 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Glud1P26443 558 aaKnown RBP9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Uchl4P58321 233 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Sec23aQ01405 765 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Aldh16a1Q571I9 802 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Brip1Q5SXJ3 1174 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 FdxrQ61578 494 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 CltbQ6IRU5 229 aaKnown RBP9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mbtd1Q6P5G3 631 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pwp2Q8BU03 919 aaKnown RBP9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Epc2Q8C0I4 808 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Lamtor4Q8CF66 99 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr1302Q8VGE9 315 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fig4Q91WF7 907 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nipsnap3bQ9CQE1 247 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gadd45gip1Q9CR59 222 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Etnk1Q9D4V0 363 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Sfmbt1Q9JMD1 863 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Smok3cA0A087WSF2 504 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rhbdl2A2AGA4 302 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Klhl3E0CZ16 587 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vmn2r100E9QAZ9 850 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cyp2d10P24456 504 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ccnb1P24860 430 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AurkaP97477 395 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pou1f1Q00286 291 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Magee2Q52KG3 523 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tbx2Q60707 711 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Svs6Q64356 99 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Slc39a14Q75N73 489 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Enpp4Q8BTJ4 456 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gfm2Q8R2Q4 779 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Q99LU8 229 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pin4Q9CWW6 131 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Prkar1aQ9DBC7 381 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nif3l1Q9EQ80 376 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Dpysl5Q9EQF6 564 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Kdelc1Q9JHP7 502 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 H2afb2S4R1M3 115 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mst1rQ62190 1378 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Prdm12A2AJ77 365 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Armt1A6H630 439 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Esp31A8R0W3 114 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 March10E9PX79 788 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rgsl1H3BL40 1073 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PfklP12382 780 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tgfb2P27090 414 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Brinp3Q499E0 766 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mib1Q80SY4 1006 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fam118bQ8C569 351 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Actr3Q99JY9 418 aaKnown RBP9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Itfg1Q99KW9 610 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fam205a1D3YZF6 1314 aa9.31□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Dip2aQ8BWT5 1523 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ttc37F8VPK0 1563 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 MndalD0QMC3 538 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Apold1E9Q0X2 246 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PargO88622 969 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rps6ka3P18654 740 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Lad1P57016 528 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 IdsQ08890 552 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fads2p1Q0VAX3 487 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pcnx4Q3UVY5 1174 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Lrrc47Q505F5 581 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mtnr1aQ61184 353 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gpr151Q7TSN6 422 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 FsbpQ8BKE5 299 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Asb14Q8C6Y6 587 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cox10Q8CFY5 443 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mtfr1Q99MB2 328 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Snrpb2Q9CQI7 225 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 PllpQ9DCU2 182 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Capn10Q9ESK3 666 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Plod3Q9R0E1 741 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Creb3l1Q9Z125 519 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 HnrnpdlQ9Z130 301 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mbd2Q9Z2E1 414 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rap1gapA2ALS5 663 aa9.3□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm3033M0QWI0 180 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms