RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 DLL3Q9NYJ7 618 aa15.48■□□□□ 0.07
PHGDH-231ENST00000641939 CDV3Q9UKY7 258 aaKnown RBP15.48■□□□□ 0.07
PHGDH-231ENST00000641939 SNX10Q9Y5X0 201 aa15.48■□□□□ 0.07
PHGDH-231ENST00000641939 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-231ENST00000641939 DRGXA6NNA5 263 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 GDF9O60383 454 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 CNTN5O94779 1100 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 C7P10643 843 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 OXTRP30559 389 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 RFC1P35251 1148 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-231ENST00000641939 PBX1P40424 430 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 PRKCIP41743 596 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 HNRNPA1L2Q32P51 320 aaKnown RBP15.47■□□□□ 0.07
PHGDH-231ENST00000641939 ARL13BQ3SXY8 428 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 SH3PXD2AQ5TCZ1 1133 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 E4F1Q66K89 784 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-231ENST00000641939 DNAJC24Q6P3W2 148 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 WDR59Q6PJI9 974 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 STRADAQ7RTN6 431 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 CACUL1Q86Y37 369 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 SYT12Q8IV01 421 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 MCOLN2Q8IZK6 566 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 DEFB119Q8N690 84 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 CENPIQ92674 756 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-231ENST00000641939 FEM1AQ9BSK4 669 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 NUP58Q9BVL2 599 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 MTG2Q9H4K7 406 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 HAUS4Q9H6D7 363 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 SLCO3A1Q9UIG8 710 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 TBC1D30Q9Y2I9 924 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 CHD5Q8TDI0 1954 aa15.47■□□□□ 0.07
PHGDH-231ENST00000641939 ITIH6Q6UXX5 1313 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 IGLV3-10A0A075B6K4 115 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 EDDM13A0A1B0GTR0 161 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 TCRBV5S1A1TA0A578 114 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 ANKRD62A6NC57 917 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 TTC34A8MYJ7 566 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 E9PAM4 449 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 KHNYNO15037 678 aaKnown RBP15.46■□□□□ 0.07
PHGDH-231ENST00000641939 SIN3BO75182 1162 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 IGLV3-19P01714 112 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 GPD1P21695 349 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 ITPKAP23677 461 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 NUMBP49757 651 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 RPS14P62263 151 aaKnown RBP15.46■□□□□ 0.07
PHGDH-231ENST00000641939 ZBTB16Q05516 673 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 ZNF33AQ06730 810 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 KLHL30Q0D2K2 578 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 RAB6CQ53S08 254 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 ALFQ53S48 1182 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 TCEAL6Q6IPX3 200 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 ZNF571Q7Z3V5 609 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-231ENST00000641939 OR52K2Q8NGK3 314 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 FAM172AQ8WUF8 416 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 TCEAL3Q969E4 200 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 ALG14Q96F25 216 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 TOE1Q96GM8 510 aaKnown RBP15.46■□□□□ 0.07
PHGDH-231ENST00000641939 ZNF419Q96HQ0 510 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-231ENST00000641939 VCPIP1Q96JH7 1222 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 RPL10LQ96L21 214 aaKnown RBP15.46■□□□□ 0.07
PHGDH-231ENST00000641939 RAB6CQ9H0N0 254 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 WSB2Q9NYS7 404 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-231ENST00000641939 TAS2R14Q9NYV8 317 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 PILRBQ9UKJ0 227 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 OR51B4Q9Y5P0 310 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 ADAMTS9Q9P2N4 1935 aa15.46■□□□□ 0.07
PHGDH-231ENST00000641939 KNL1Q8NG31 2342 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 A0A1W2PQJ5 194 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 TARSL2A2RTX5 802 aaKnown RBP15.45■□□□□ 0.06
PHGDH-231ENST00000641939 SRGAP2O75044 1071 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 DNTTP04053 509 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 RHOCP08134 193 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 RRM1P23921 792 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 ADRA1BP35368 520 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 HOXD12P35452 270 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 NNMTP40261 264 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 STK19P49842 368 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-231ENST00000641939 LIMK1P53667 647 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 HDAC4P56524 1084 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 PPP1R15BQ5SWA1 713 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 C9orf64Q5T6V5 341 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 PEAR1Q5VY43 1037 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-231ENST00000641939 ZNF776Q68DI1 518 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-231ENST00000641939 SETD3Q86TU7 594 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-231ENST00000641939 SLC41A1Q8IVJ1 513 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 FOXJ1Q92949 421 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 HSPA12BQ96MM6 686 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 MCEEQ96PE7 176 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 ZYG11BQ9C0D3 744 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 MUC3BQ9H195 1237 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 RSPH9Q9H1X1 276 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-231ENST00000641939 RXFP3Q9NSD7 469 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 TMEM74BQ9NUR3 256 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 MPP6Q9NZW5 540 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 IFNKQ9P0W0 207 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 EVLQ9UI08 416 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-231ENST00000641939 VPS28Q9UK41 221 aa15.45■□□□□ 0.06
PHGDH-231ENST00000641939 ASCC3Q8N3C0 2202 aaKnown RBP15.45■□□□□ 0.06
PHGDH-231ENST00000641939 ATXN2Q99700 1313 aaKnown RBP15.44■□□□□ 0.06
PHGDH-231ENST00000641939 TMCO5BA8MYB1 307 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms