RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 FAM91A1Q658Y4 838 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 TMEM154Q6P9G4 183 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 ARCQ7LC44 396 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 ZMIZ2Q8NF64 920 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 SMOQ99835 787 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 ABHD16BQ9H3Z7 469 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 NRCAMQ92823 1304 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 PDCD11Q14690 1871 aaKnown RBP17.22■□□□□ 0.35
PHGDH-223ENST00000641597 E9PBE3 544 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 KLHL41O60662 606 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 POLBP06746 335 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 RALBP11234 206 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 HOXD8P13378 290 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-223ENST00000641597 ACADSP16219 412 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 RAP1GDS1P52306 607 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 CCL14Q16627 93 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 C4orf22Q6V702 233 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 RNF111Q6ZNA4 994 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 ARHGAP36Q6ZRI8 547 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 WDR75Q8IWA0 830 aaKnown RBP17.22■□□□□ 0.35
PHGDH-223ENST00000641597 SPATA6LQ8N4H0 392 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 ZNF560Q96MR9 790 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 PTPN18Q99952 460 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 MMADHCQ9H3L0 296 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-223ENST00000641597 DDIT4Q9NX09 232 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 DDX43Q9NXZ2 648 aaKnown RBP17.22■□□□□ 0.35
PHGDH-223ENST00000641597 DLGAP2Q9P1A6 1054 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 VANGL2Q9ULK5 521 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 RPL26L1Q9UNX3 145 aaKnown RBP17.22■□□□□ 0.35
PHGDH-223ENST00000641597 GOLGA8QA0A0J9YX86 632 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 ZCWPW2A0A1B0GU75 182 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 GOLGA8OA6NCC3 632 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 HACD1B0YJ81 288 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 GOLGA8NF8WBI6 632 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 F2P00734 622 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 LMNAP02545 664 aaKnown RBP17.21■□□□□ 0.35
PHGDH-223ENST00000641597 MLNP12872 115 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 NFKB1P19838 968 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 MFSD10Q14728 455 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 OTOP3Q7RTS5 596 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 ZNF419Q96HQ0 510 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-223ENST00000641597 TNIP3Q96KP6 325 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 FAM124BQ9H5Z6 455 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-223ENST00000641597 DCXO43602 365 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 ZBTB14O43829 449 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 STK10O94804 968 aaKnown RBP17.21■□□□□ 0.35
PHGDH-223ENST00000641597 SERPINE1P05121 402 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 CHRNGP07510 517 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 ANPEPP15144 967 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 AVPR1AP37288 418 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 GLRBP48167 497 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 GRB14Q14449 540 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 MIOSQ9NXC5 875 aa17.21■□□□□ 0.35
PHGDH-223ENST00000641597 CORO1CQ9ULV4 474 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-223ENST00000641597 MBLAC1A4D2B0 266 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-223ENST00000641597 MAGEC1O60732 1142 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 LUC7L3O95232 432 aaKnown RBP17.2■□□□□ 0.34
PHGDH-223ENST00000641597 CPA3P15088 417 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 NMBRP28336 390 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 GP5P40197 560 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 TPI1P60174 286 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 ZNF460Q14592 562 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 SV2CQ496J9 727 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 SLC9B1Q4ZJI4 515 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 TCHHL1Q5QJ38 904 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-223ENST00000641597 BNIPLQ7Z465 357 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 KDELC2Q7Z4H8 507 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 LIMS2Q7Z4I7 341 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 SPATA22Q8NHS9 363 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 PPP1R12CQ9BZL4 782 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 APOBEC2Q9Y235 224 aaKnown RBP17.2■□□□□ 0.34
PHGDH-223ENST00000641597 TSC2P49815 1807 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 ENO4A6NNW6 628 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 PHGDHO43175 533 aaKnown RBP17.2■□□□□ 0.34
PHGDH-223ENST00000641597 AP1G2O75843 785 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 MYL3P08590 195 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 UBTFL6P0CB48 400 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-223ENST00000641597 NUMBP49757 651 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 CLCNKBP51801 687 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 ACTR3P61158 418 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 PAFAH1B3Q15102 231 aaKnown RBP17.2■□□□□ 0.34
PHGDH-223ENST00000641597 RNF220Q5VTB9 566 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 FRMD7Q6ZUT3 714 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 TLK2Q86UE8 772 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 GAD1Q99259 594 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 WDR55Q9H6Y2 383 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-223ENST00000641597 PIDD1Q9HB75 910 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 DCDC2Q9UHG0 476 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 CPA4Q9UI42 421 aa17.2■□□□□ 0.34
PHGDH-223ENST00000641597 A0A096LPK6 155 aa17.19■□□□□ 0.34
PHGDH-223ENST00000641597 SMIM35A0A1B0GVV1 85 aa17.19■□□□□ 0.34
PHGDH-223ENST00000641597 RRN3P2A6NIE6 340 aa17.19■□□□□ 0.34
PHGDH-223ENST00000641597 TK2O00142 265 aa17.19■□□□□ 0.34
PHGDH-223ENST00000641597 NEMP1O14524 444 aa17.19■□□□□ 0.34
PHGDH-223ENST00000641597 PPP1R12AO14974 1030 aaPredicted RBP17.19■□□□□ 0.34
PHGDH-223ENST00000641597 STRNO43815 780 aa17.19■□□□□ 0.34
PHGDH-223ENST00000641597 KCNE1P15382 129 aa17.19■□□□□ 0.34
PHGDH-223ENST00000641597 GCKP35557 465 aa17.19■□□□□ 0.34
PHGDH-223ENST00000641597 ABCE1P61221 599 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms