RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 GEMIN4P57678 1058 aaKnown RBP13.3□□□□□ -0.28
PHGDH-218ENST00000641491 ZP2Q05996 745 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 SLC12A1Q13621 1099 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 DPYSQ14117 519 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 PDK1Q15118 436 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 PARP15Q460N3 678 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 PAPD7Q5XG87 772 aaKnown RBP13.3□□□□□ -0.28
PHGDH-218ENST00000641491 ZNF783Q6ZMS7 281 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 CYP4V2Q6ZWL3 525 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-218ENST00000641491 ANKS1BQ7Z6G8 1248 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 ADAT2Q7Z6V5 191 aaKnown RBP13.3□□□□□ -0.28
PHGDH-218ENST00000641491 TMEM25Q86YD3 366 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 SUGP1Q8IWZ8 645 aaKnown RBP13.3□□□□□ -0.28
PHGDH-218ENST00000641491 ADGRG2Q8IZP9 1017 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 AHI1Q8N157 1196 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 NAT16Q8N8M0 369 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 CCNYQ8ND76 341 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 CCDC26Q8TAB7 109 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 WFIKKN2Q8TEU8 576 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 FAM83CQ9BQN1 747 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 C2orf49Q9BVC5 232 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-218ENST00000641491 FRMD8P1Q9BZ68 369 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-218ENST00000641491 PLA2G2FQ9BZM2 168 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 ATP13A1Q9HD20 1204 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 SLC25A13Q9UJS0 675 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 SORCS3Q9UPU3 1222 aa13.3□□□□□ -0.28
PHGDH-218ENST00000641491 ZNF318Q5VUA4 2279 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 IGLV3-10A0A075B6K4 115 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 ILVBLA1L0T0 632 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 APOC4-APOC2K7ER74 178 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 KRIT1O00522 736 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 GREM1O60565 184 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 CNTN5O94779 1100 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 APOC2P02655 101 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 POLR2EP19388 210 aaKnown RBP13.29□□□□□ -0.28
PHGDH-218ENST00000641491 HOXD9P28356 352 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-218ENST00000641491 YBEYP58557 167 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-218ENST00000641491 ST8SIA6P61647 398 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 KDSRQ06136 332 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 SULT2A1Q06520 285 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 TNK2Q07912 1038 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 SEMA3BQ13214 749 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 MANEALQ5VSG8 457 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 FYB2Q5VWT5 728 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 CCDC70Q6NSX1 233 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 TIGD7Q6NT04 549 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-218ENST00000641491 RHBDF2Q6PJF5 856 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 BBS12Q6ZW61 710 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 GSTA5Q7RTV2 222 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 SLC13A5Q86YT5 568 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-218ENST00000641491 CDKL3Q8IVW4 592 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-218ENST00000641491 SLC44A3Q8N4M1 653 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 FAM71BQ8TC56 605 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 SHDQ96IW2 340 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 CELF6Q96J87 481 aaKnown RBP13.29□□□□□ -0.28
PHGDH-218ENST00000641491 CCDC114Q96M63 670 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 CIPCQ9C0C6 399 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 BRD8Q9H0E9 1235 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 MAGEH1Q9H213 219 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 GTSE1Q9NYZ3 720 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 GGA2Q9UJY4 613 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 PIAS3Q9Y6X2 628 aa13.29□□□□□ -0.28
PHGDH-218ENST00000641491 NUP210Q8TEM1 1887 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-218ENST00000641491 OBSL1O75147 1896 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 TBC1D3BA6NDS4 549 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 ZSCAN5CA6NGD5 496 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-218ENST00000641491 WASH4PA8MWX3 477 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 STK25O00506 426 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 CACNG3O60359 315 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 PENKP01210 267 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-218ENST00000641491 ATP5BP06576 529 aaKnown RBP13.28□□□□□ -0.28
PHGDH-218ENST00000641491 EIF2DP41214 584 aaKnown RBP13.28□□□□□ -0.28
PHGDH-218ENST00000641491 ARSEP51690 589 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 GNA12Q03113 381 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 AP1B1Q10567 949 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 GRSF1Q12849 480 aaKnown RBP eCLIP13.28□□□□□ -0.28
PHGDH-218ENST00000641491 DMC1Q14565 340 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 WHAMMP3Q1A5X7 153 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 C5orf22Q49AR2 442 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 ALFQ53S48 1182 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 RETSATQ6NUM9 610 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 DARS2Q6PI48 645 aaKnown RBP13.28□□□□□ -0.28
PHGDH-218ENST00000641491 LRRC49Q8IUZ0 686 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 UBALD2Q8IYN6 164 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 PCDH19Q8TAB3 1148 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 FIBINQ8TAL6 211 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 RIN3Q8TB24 985 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 ACTRT1Q8TDG2 376 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 TFB1MQ8WVM0 346 aaKnown RBP13.28□□□□□ -0.28
PHGDH-218ENST00000641491 TSC1Q92574 1164 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 FAF2Q96CS3 445 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 ASIC4Q96FT7 647 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 RUNDC3BQ96NL0 473 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 LRRC3BQ96PB8 259 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 PNKPQ96T60 521 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 ABCB8Q9NUT2 735 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 SEPT10Q9P0V9 454 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 DUSP12Q9UNI6 340 aa13.28□□□□□ -0.28
PHGDH-218ENST00000641491 MRPS17Q9Y2R5 130 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms