RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CACNG3O60359 315 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 CLDN11O75508 207 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 SOAT2O75908 522 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 SEC24AO95486 1093 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 CXCL14O95715 111 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 AP2A1O95782 977 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 GLUD1P00367 558 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 CPP00450 1065 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 OAS1P00973 400 aaKnown RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 POU2F2P09086 479 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 RPL17P18621 184 aaKnown RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 PTPN3P26045 913 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 HOXA9P31269 272 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 GEMP55040 296 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 CDH4P55283 916 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 OXCT1P55809 520 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 PPP2R2AP63151 447 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 TNK2Q07912 1038 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 TWF1Q12792 350 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 ILF2Q12905 390 aaKnown RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 HNRNPDQ14103 355 aaKnown RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 FRG1Q14331 258 aaKnown RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 TERF2Q15554 542 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 BBS9Q3SYG4 887 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 TNFAIP8L3Q5GJ75 292 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 LGSNQ5TDP6 509 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 PIK3R6Q5UE93 754 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 ANKRD22Q5VYY1 191 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF783Q6ZMS7 281 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 CHST9Q7L1S5 443 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 TMC7Q7Z402 723 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 DNAJB7Q7Z6W7 309 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 NLRP14Q86W24 1093 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 MIB1Q86YT6 1006 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF683Q8IZ20 524 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF567Q8N184 647 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 FBXO36Q8NEA4 188 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 MAML1Q92585 1016 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 MRPS31Q92665 395 aaKnown RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 C9orf72Q96LT7 481 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 TEKT5Q96M29 485 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 IL12RB2Q99665 862 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 ACSS3Q9H6R3 686 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 LRRC4CQ9HCJ2 640 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 TMPRSS4Q9NRS4 437 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 SEPT10Q9P0V9 454 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 BCCIPQ9P287 314 aaKnown RBP eCLIP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 PSMC3IPQ9P2W1 217 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 RSPH14Q9UHP6 348 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 LSM7Q9UK45 103 aaKnown RBP9.96□□□□□ -0.82
PHGDH-215ENST00000641371 IKBKGQ9Y6K9 419 aa9.96□□□□□ -0.82
PHGDH-215ENST00000641371 SHROOM3Q8TF72 1996 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 TLDC2A0PJX2 215 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 SDR42E2A6NKP2 422 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 RAMP2O60895 175 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 METTL18O95568 372 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 OLFM2O95897 454 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 SHBGP04278 402 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 CCNB1P14635 433 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 EN2P19622 333 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 TACR2P21452 398 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 CNTFP26441 200 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 CTNNB1P35222 781 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 NPY2RP49146 381 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 SLC18A1P54219 525 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 GEMIN4P57678 1058 aaKnown RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 IL10RBQ08334 325 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 RFTN1Q14699 578 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 SLC14A2Q15849 920 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 LILRA6Q6PI73 481 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 C3orf62Q6ZUJ4 267 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 C16orf59Q7L2K0 433 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 PRUNE1Q86TP1 453 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 SETD3Q86TU7 594 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 ARHGAP12Q8IWW6 846 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 C7orf61Q8IZ16 206 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 NPWQ8N729 165 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 ZNF557Q8N988 423 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 KLHL23Q8NBE8 558 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 OR2W6PQ8NHA6 318 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 GABPB2Q8TAK5 448 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 GPR152Q8TDT2 470 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 CDKL2Q92772 493 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 CENPTQ96BT3 561 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 ALKBH8Q96BT7 664 aaKnown RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 ABHD8Q96I13 439 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 RPRD1AQ96P16 312 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 FCRL5Q96RD9 977 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 EBNA1BP2Q99848 306 aaKnown RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 PRMT1Q99873 361 aaKnown RBP9.95□□□□□ -0.82
PHGDH-215ENST00000641371 MAGEH1Q9H213 219 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 CCSER2Q9H7U1 834 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 C10orf88Q9H8K7 445 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 ENTPD7Q9NQZ7 604 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 TLR9Q9NR96 1032 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 VPS45Q9NRW7 570 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 BFARQ9NZS9 450 aa9.95□□□□□ -0.82
PHGDH-215ENST00000641371 ZC3H7BQ9UGR2 993 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms