RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 NEU3Q9UQ49 428 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 TLL2Q9Y6L7 1015 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 THSD7BQ9C0I4 1608 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 SNNO75324 88 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-211ENST00000641213 HAUS5O94927 633 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 GSRP00390 522 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 SRGAP2BP0DMP2 458 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 CST5P28325 142 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-211ENST00000641213 CAP1Q01518 475 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 TMEM135Q86UB9 458 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 CEP57Q86XR8 500 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 DNAAF3Q8N9W5 541 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 ZNF669Q96BR6 464 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-211ENST00000641213 TBC1D31Q96DN5 1066 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 TEKT5Q96M29 485 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 CPNE1Q99829 537 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 SIK2Q9H0K1 926 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 ARHGAP42A6NI28 874 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 IRAK2O43187 625 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 GLRA3O75311 464 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 JCHAINP01591 159 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 PRKAR2AP13861 404 aaKnown RBP17.45■□□□□ 0.38
PHGDH-211ENST00000641213 TYMPP19971 482 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 CYP2C18P33260 490 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 GP5P40197 560 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 IRX4P78413 519 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 PDE1BQ01064 536 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 ITGA7Q13683 1181 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 N4BP2L1Q5TBK1 243 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-211ENST00000641213 C16orf46Q6P387 395 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.45■□□□□ 0.38
PHGDH-211ENST00000641213 AGAP11Q8TF27 550 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 PRR11Q96HE9 360 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-211ENST00000641213 TBC1D10AQ9BXI6 508 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 C20orf27Q9GZN8 174 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 ABCC13Q9NSE7 274 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 ARL8BQ9NVJ2 186 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 KCNK4Q9NYG8 393 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 TXNDC16Q9P2K2 825 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 DCDC2Q9UHG0 476 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 NOD1Q9Y239 953 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 PLXNA3P51805 1871 aa17.45■□□□□ 0.38
PHGDH-211ENST00000641213 ZCWPW2A0A1B0GU75 182 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 TNFRSF10BO14763 440 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 INPPL1O15357 1258 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 HNRNPCL1O60812 293 aaKnown RBP17.44■□□□□ 0.38
PHGDH-211ENST00000641213 USP1O94782 785 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 ELNP15502 786 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 PTPN4P29074 926 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 PGFP49763 221 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 SLC5A3P53794 718 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 ZBTB16Q05516 673 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 E2F5Q15329 346 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 CERCAMQ5T4B2 595 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 GRTP1Q5TC63 336 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 RWDD4Q6NW29 188 aaKnown RBP17.44■□□□□ 0.38
PHGDH-211ENST00000641213 CCDC91Q7Z6B0 441 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 SPATA2LQ8IUW3 424 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-211ENST00000641213 PCSK9Q8NBP7 692 aaKnown RBP17.44■□□□□ 0.38
PHGDH-211ENST00000641213 DOCK4Q8N1I0 1966 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 CEP350Q5VT06 3117 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 ARHGEF37A1IGU5 675 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 B4GALT3O60512 393 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 GRIK1P39086 918 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 NPY2RP49146 381 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 STX3Q13277 289 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 FRG1Q14331 258 aaKnown RBP17.44■□□□□ 0.38
PHGDH-211ENST00000641213 DBN1Q16643 649 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 HSF5Q4G112 596 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-211ENST00000641213 ANKRD20A4Q4UJ75 823 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 FASTKD1Q53R41 847 aaKnown RBP17.44■□□□□ 0.38
PHGDH-211ENST00000641213 WLSQ5T9L3 541 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 BTBD8Q5XKL5 378 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 ZCCHC23Q6ZST2 131 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 ARID3BQ8IVW6 561 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-211ENST00000641213 ATP2A3Q93084 1043 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 PTCD3Q96EY7 689 aaKnown RBP17.44■□□□□ 0.38
PHGDH-211ENST00000641213 APOL2Q9BQE5 337 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 PCDHB8Q9UN66 801 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 VWA8A3KMH1 1905 aa17.44■□□□□ 0.38
PHGDH-211ENST00000641213 TMEM88BA6NKF7 163 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 PLIN3O60664 434 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 COG7P83436 770 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 YWHAHQ04917 246 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-211ENST00000641213 ZNF33AQ06730 810 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 PREPLQ4J6C6 727 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-211ENST00000641213 PPM1JQ5JR12 505 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 BRMS1LQ5PSV4 323 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 C4orf50Q6ZRC1 276 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 ARHGAP36Q6ZRI8 547 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 RTN4RL1Q86UN2 441 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-211ENST00000641213 LONP2Q86WA8 852 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 CNTD1Q8N815 330 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 TSGA13Q96PP4 275 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 HAPLN3Q96S86 360 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 RBBP8Q99708 897 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 TUBB6Q9BUF5 446 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 SMOC2Q9H3U7 446 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 TLE6Q9H808 572 aa17.43■□□□□ 0.38
PHGDH-211ENST00000641213 UBP1Q9NZI7 540 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms