RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 ZDHHC5Q9C0B5 715 aa25.97■■□□□ 1.75
VEGFA-232ENST00000640653 PABPC3Q9H361 631 aaKnown RBP25.97■■□□□ 1.75
VEGFA-232ENST00000640653 SLC32A1Q9H598 525 aa25.97■■□□□ 1.75
VEGFA-232ENST00000640653 SLCO3A1Q9UIG8 710 aa25.97■■□□□ 1.75
VEGFA-232ENST00000640653 ADCY5O95622 1261 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 GGCXP38435 758 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 CDH4P55283 916 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 UBXN1Q04323 297 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 C5orf22Q49AR2 442 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 LRSAM1Q6UWE0 723 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 TRIM72Q6ZMU5 477 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 USP30Q70CQ3 517 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 GANCQ8TET4 914 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 SNX19Q92543 992 aa25.96■■□□□ 1.75
VEGFA-232ENST00000640653 NAT10Q9H0A0 1025 aaKnown RBP25.96■■□□□ 1.75
VEGFA-232ENST00000640653 C6orf106Q9H6K1 298 aaPredicted RBP25.96■■□□□ 1.75
VEGFA-232ENST00000640653 EIF2B4Q9UI10 523 aaKnown RBP25.96■■□□□ 1.75
VEGFA-232ENST00000640653 PCDH15Q96QU1 1955 aa25.95■■□□□ 1.75
VEGFA-232ENST00000640653 LRRC10BA6NIK2 292 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 BCAT2O15382 392 aaPredicted RBP25.95■■□□□ 1.74
VEGFA-232ENST00000640653 CYP1A1P04798 512 aaPredicted RBP25.95■■□□□ 1.74
VEGFA-232ENST00000640653 ZNF18P17022 549 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 FLT3P36888 993 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 STK19P49842 368 aaPredicted RBP25.95■■□□□ 1.74
VEGFA-232ENST00000640653 FMO1Q01740 532 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 TYRO3Q06418 890 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 CST6Q15828 149 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 LRRC31Q6UY01 552 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 ARCQ7LC44 396 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 C14orf80Q86SX3 495 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 DNAAF2Q9NVR5 837 aaKnown RBP25.95■■□□□ 1.74
VEGFA-232ENST00000640653 SLC25A13Q9UJS0 675 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 TMEM59LQ9UK28 342 aa25.95■■□□□ 1.74
VEGFA-232ENST00000640653 UPK3BL1B0FP48 263 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 UPK3BL2E5RIL1 263 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 GIPC1O14908 333 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 PMLP29590 882 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 IRAK1P51617 712 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 GRIK2Q13002 908 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 SEMA3BQ13214 749 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 NCAPHQ15003 741 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 MMAAQ8IVH4 418 aaKnown RBP25.94■■□□□ 1.74
VEGFA-232ENST00000640653 DEFB124Q8NES8 71 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 FEM1AQ9BSK4 669 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 FBXL12Q9NXK8 326 aa25.94■■□□□ 1.74
VEGFA-232ENST00000640653 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.94■■□□□ 1.74
VEGFA-232ENST00000640653 NCOR2Q9Y618 2525 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 MID1O15344 667 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 CHRNB2P17787 502 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 MMP8P22894 467 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 RDXP35241 583 aaKnown RBP25.93■■□□□ 1.74
VEGFA-232ENST00000640653 NUMBP49757 651 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 VASPP50552 380 aaPredicted RBP25.93■■□□□ 1.74
VEGFA-232ENST00000640653 ZNF252P-AS1Q0IIN9 211 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 AOPEPQ8N6M6 819 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 PTPRN2Q92932 1015 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 C1orf74Q96LT6 269 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 CFAP57Q96MR6 1250 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 ERGIC2Q96RQ1 377 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 OMDQ99983 421 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 ANLNQ9NQW6 1124 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 METTL5Q9NRN9 209 aaKnown RBP25.93■■□□□ 1.74
VEGFA-232ENST00000640653 TMEM63CQ9P1W3 806 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 VPS28Q9UK41 221 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 ANGPTL2Q9UKU9 493 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 TBC1D30Q9Y2I9 924 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 PI4KAP42356 2102 aa25.93■■□□□ 1.74
VEGFA-232ENST00000640653 ADH1BP00325 375 aa25.92■■□□□ 1.74
VEGFA-232ENST00000640653 ELAVL3Q14576 367 aaKnown RBP25.92■■□□□ 1.74
VEGFA-232ENST00000640653 STK40Q8N2I9 435 aa25.92■■□□□ 1.74
VEGFA-232ENST00000640653 OR2I1PQ8NGU4 316 aa25.92■■□□□ 1.74
VEGFA-232ENST00000640653 ALG14Q96F25 216 aa25.92■■□□□ 1.74
VEGFA-232ENST00000640653 HAPLN3Q96S86 360 aa25.92■■□□□ 1.74
VEGFA-232ENST00000640653 FAM129BQ96TA1 746 aa25.92■■□□□ 1.74
VEGFA-232ENST00000640653 MUC3BQ9H195 1237 aa25.92■■□□□ 1.74
VEGFA-232ENST00000640653 GON4LQ3T8J9 2241 aa25.92■■□□□ 1.74
VEGFA-232ENST00000640653 A0A1W2PP55 124 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 I6L893 689 aaPredicted RBP25.91■■□□□ 1.74
VEGFA-232ENST00000640653 RNASEH2AO75792 299 aaKnown RBP25.91■■□□□ 1.74
VEGFA-232ENST00000640653 FSBPO95073 299 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 SLC8A1P32418 973 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 PSMD8P48556 350 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 SLC14A1Q13336 389 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 TRNP1Q6NT89 227 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 IL27RAQ6UWB1 636 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 BNIPLQ7Z465 357 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 PIP4P1Q86T03 277 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 ZNF683Q8IZ20 524 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 OR52K2Q8NGK3 314 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 C1orf216Q8TAB5 229 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 SLC30A5Q8TAD4 765 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 BIRC7Q96CA5 298 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 C11orf70Q9BRQ4 267 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 HSD3B7Q9H2F3 369 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 FZD4Q9ULV1 537 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 OR51B4Q9Y5P0 310 aa25.91■■□□□ 1.74
VEGFA-232ENST00000640653 ADAMTS9Q9P2N4 1935 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 DRGXA6NNA5 263 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 CNTN5O94779 1100 aa25.9■■□□□ 1.74
VEGFA-232ENST00000640653 RHOCP08134 193 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms