RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 SLC25A14O95258 325 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 GUCA1CO95843 209 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 FTH1P02794 183 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CCDC159P0C7I6 412 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 TRPC1P48995 793 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ITGA8P53708 1063 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ITGA9Q13797 1035 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 DDX39BQ13838 428 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 TRADDQ15628 312 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CLEC16AQ2KHT3 1053 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 DLK2Q6UY11 383 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 STOX1Q6ZVD7 989 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 TAS1R3Q7RTX0 852 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CAMK1DQ8IU85 385 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 NALCNQ8IZF0 1738 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 LMO7Q8WWI1 1683 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MLPHQ9BV36 600 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 TTYH1Q9H313 450 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 HAUS4Q9H6D7 363 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MIEF1Q9NQG6 463 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ARHGEF3Q9NR81 526 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CEP72Q9P209 647 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ADAMTS1Q9UHI8 967 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 PHTF1Q9UMS5 762 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 DNAJC16Q9Y2G8 782 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 LTN1O94822 1766 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ARL5CA6NH57 179 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 SHISA7A6NL88 538 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CLDN4O14493 209 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ZSCAN9O15535 394 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 SRP72O76094 671 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 POLBP06746 335 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CCT5P48643 541 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 NUMBP49757 651 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 TMPRSS15P98073 1019 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 GSTA3Q16772 222 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MINDY4Q4G0A6 757 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 EPC2Q52LR7 807 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MIIPQ5JXC2 388 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ATG16L1Q676U5 607 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 RCOR2Q8IZ40 523 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ARL14EPQ8N8R7 260 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 LPCAT1Q8NF37 534 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 TACO1Q9BSH4 297 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 POLR1EQ9GZS1 481 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CISHQ9NSE2 258 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 PLK2Q9NYY3 685 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 SNX6Q9UNH7 406 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MYH2Q9UKX2 1941 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 NPHP3-ACAD11A0A0J9YXS1 232 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 GJB6O95452 261 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 GRM5P41594 1212 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 RAB14P61106 215 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 LRRC8EQ6NSJ5 796 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 RASSF3Q86WH2 238 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 FAM9CQ8IZT9 166 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 RHBGQ9H310 441 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 SORCS3Q9UPU3 1222 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ENTPD4Q9Y227 616 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CPQQ9Y646 472 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 RGPD8O14715 1765 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 DOPEY2Q9Y3R5 2298 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CNTNAP5Q8WYK1 1306 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CLASP2O75122 1294 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 RPP40O75818 363 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 SOD2P04179 222 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 PABPC1P11940 636 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MYL6P60660 151 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MANEAQ5SRI9 462 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 COLGALT1Q8NBJ5 622 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CEP76Q8TAP6 659 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 BTN2A2Q8WVV5 523 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 UBE2E3Q969T4 207 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 COL26A1Q96A83 441 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MRPL38Q96DV4 380 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MSANTD3Q96H12 275 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CDC6Q99741 560 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 OLFM1Q99784 485 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 OSBPL6Q9BZF3 934 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ZNF518BQ9C0D4 1074 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 KCNN2Q9H2S1 579 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ADAM7Q9H2U9 754 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 PABPC3Q9H361 631 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 KRCC1Q9NPI7 259 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 MED4Q9NPJ6 270 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 IMP3Q9NV31 184 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 SERTAD3Q9UJW9 196 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 FAM221BA6H8Z2 402 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 ANKDD1BA6NHY2 528 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 RASA4BC9J798 803 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 RASA4O43374 803 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CLEC3AO75596 197 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 WFS1O76024 890 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CYP11B1P15538 503 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CORO1AP31146 461 aaKnown RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 CTSOP43234 321 aaPredicted RBP5.12□□□□□ -1.59
SCN1A-218ENST00000640036 PPARDQ03181 441 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 IFT88Q13099 833 aa5.12□□□□□ -1.59
SCN1A-218ENST00000640036 RAP1GAP2Q684P5 730 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms