RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, human

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC7-215	ENST00000639629	HSPA6	P17066	643 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	FGFR2	P21802	821 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	MCM3	P25205	808 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	HOXC8	P31273	242 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	MTNR1A	P48039	350 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	LUM	P51884	338 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ERVFC1-1	P60608	527 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	RPL15	P61313	204 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	MINDY4	Q4G0A6	757 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SGO1	Q5FBB7	561 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	TAF7L	Q5H9L4	462 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	PRSS57	Q6UWY2	283 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	C16orf89	Q6UX73	402 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	BRIX1	Q8TDN6	353 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	MMS19	Q96T76	1030 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	LITAF	Q99732	161 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	CNNM1	Q9NRU3	951 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	LRFN1	Q9P244	771 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SLC4A4	Q9Y6R1	1079 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	TENM4	Q6N022	2769 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SLIT3	O75094	1523 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	MSGN1	A6NI15	193 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	NR5A2	O00482	541 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	DSCR3	O14972	297 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	TSPAN6	O43657	245 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	LARGE1	O95461	756 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	AHSG	P02765	367 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	NGFR	P08138	427 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	PKM	P14618	531 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	DAO	P14920	347 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	GM2A	P17900	193 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SERPINF1	P36955	418 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	GUCY2F	P51841	1108 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SLC12A2	P55011	1212 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	KRTAP12-2	P59991	146 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	KLHL17	Q6TDP4	642 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	DGLUCY	Q7Z3D6	616 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	CAND1	Q86VP6	1230 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	DCUN1D3	Q8IWE4	304 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	TCP11L2	Q8N4U5	519 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	MB21D1	Q8N884	522 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ZNF548	Q8NEK5	533 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	TRPC4AP	Q8TEL6	797 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ERCC4	Q92889	916 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	FCRL5	Q96RD9	977 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	DNAJC2	Q99543	621 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ACO2	Q99798	780 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	VRK1	Q99986	396 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	RBM4B	Q9BQ04	359 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	DDX50	Q9BQ39	737 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SYT17	Q9BSW7	474 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	NMRK2	Q9NPI5	230 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	PRDM8	Q9NQV8	689 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	OBP2A	Q9NY56	170 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	C1RL	Q9NZP8	487 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	UBA2	Q9UBT2	640 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	PCDHA13	Q9Y5I0	950 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	FAT2	Q9NYQ8	4349 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	HMGXB3	Q12766	1538 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	EMSY	Q7Z589	1322 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	IGLV5-37	A0A075B6J1	123 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	C3orf70	A6NLC5	250 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629		I6L893	689 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	NPC1	O15118	1278 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	UNC5C	O95185	931 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	PRB2	P02812	416 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ABCG1	P45844	678 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ITK	Q08881	620 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	INO80D	Q53TQ3	878 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	EFCAB2	Q5VUJ9	269 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	CNNM4	Q6P4Q7	775 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SLC29A4	Q7RTT9	530 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SATL1	Q86VE3	508 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SLC44A3	Q8N4M1	653 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	DEPTOR	Q8TB45	409 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ZCRB1	Q8TBF4	217 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	OSCP1	Q8WVF1	389 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	STON2	Q8WXE9	905 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	HERVK_113	Q902F9	699 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	HOOK2	Q96ED9	719 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	C1orf147	Q96MC9	270 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	DUX3	Q96PT4	197 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	TEFM	Q96QE5	360 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SMAD5	Q99717	465 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SLC25A33	Q9BSK2	321 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	PNRC2	Q9NPJ4	139 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ACAD8	Q9UKU7	415 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	INTU	Q9ULD6	942 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	PCDHA3	Q9Y5H8	950 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	KAT6A	Q92794	2004 aa		0.22	□□□□□ -2.37
CCDC7-215	ENST00000639629	ADGRF5	Q8IZF2	1346 aa		0.22	□□□□□ -2.37
CCDC7-215	ENST00000639629	ZNF521	Q96K83	1311 aa		0.22	□□□□□ -2.37
CCDC7-215	ENST00000639629	SLC22A23	A1A5C7	686 aa		0.22	□□□□□ -2.37
CCDC7-215	ENST00000639629	UBE2Q2L	H0YL09	131 aa		0.22	□□□□□ -2.37
CCDC7-215	ENST00000639629	LDB2	O43679	373 aa		0.22	□□□□□ -2.37
CCDC7-215	ENST00000639629	HEXA	P06865	529 aa		0.22	□□□□□ -2.37
CCDC7-215	ENST00000639629	LINC00271	P0C7V0	271 aa		0.22	□□□□□ -2.37
CCDC7-215	ENST00000639629	UNG	P13051	313 aa	Predicted RBP	0.22	□□□□□ -2.37
CCDC7-215	ENST00000639629	CXCR3	P49682	368 aa		0.22	□□□□□ -2.37

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms