RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CYP3A5P20815 502 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MDH1P40925 334 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PSMC6P62333 389 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RAB33AQ14088 237 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SEC23BQ15437 767 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 KBTBD6Q86V97 674 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RALGPS2Q86X27 583 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CLYBLQ8N0X4 340 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SLC37A3Q8NCC5 494 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 OR9A1PQ8NGU1 263 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PIWIL2Q8TC59 973 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MUL1Q969V5 352 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CHAMP1Q96JM3 812 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF578Q96N58 590 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ZKSCAN3Q9BRR0 538 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PPA2Q9H2U2 334 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RCOR3Q9P2K3 495 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 GAB2Q9UQC2 676 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CDC42BPAQ5VT25 1732 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ABCC12Q96J65 1359 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 USP27XA6NNY8 438 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CKMP06732 381 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF888P0CJ79 500 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 GTF2H1P32780 548 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ALDH7A1P49419 539 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CLK2P49760 499 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CPT1AP50416 773 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CAPZA1P52907 286 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 GTF2IP78347 998 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PMS2P3Q13401 168 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 DHCR24Q15392 516 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ADGRF1Q5T601 910 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 USPL1Q5W0Q7 1092 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CYP4X1Q8N118 509 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 NCOA7Q8NI08 942 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 TNFRSF14Q92956 283 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MAP6Q96JE9 813 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 NT5C1BQ96P26 610 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PDCD10Q9BUL8 212 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 DHX33Q9H6R0 707 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 S100A14Q9HCY8 104 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 TIGARQ9NQ88 270 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 KLHL11Q9NVR0 708 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 HEATR5AQ86XA9 2040 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RTL1A6NKG5 1358 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MAP3K13O43283 966 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 NDUFA2O43678 99 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 FMO6PO60774 539 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SLC2A3P11169 496 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CYLC1P35663 651 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 EPHB4P54760 987 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RFTN1Q14699 578 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 NFIXQ14938 502 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 GPAT3Q53EU6 434 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF805Q5CZA5 627 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RARS2Q5T160 578 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PDZK1Q5T2W1 519 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RIPPLY2Q5TAB7 128 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 FAM160B1Q5W0V3 765 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CXorf57Q6NSI4 855 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 DCDC5Q6ZRR9 648 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 C16orf59Q7L2K0 433 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 TIGD4Q8IY51 512 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CHPT1Q8WUD6 406 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ING5Q8WYH8 240 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CAPZA3Q96KX2 299 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CLPBQ9H078 707 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RAB20Q9NX57 234 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 DOCK8Q8NF50 2099 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CAPN8A6NHC0 703 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CASC3O15234 703 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TM9SF1O15321 606 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ALDH5A1P51649 535 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 GBX2P52951 348 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 FUT2Q10981 343 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 YIF1BQ5BJH7 314 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 FBXL6Q8N531 539 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PLPP7Q8NBV4 271 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 OR6Q1Q8NGQ2 317 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 RP9Q8TA86 221 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 C19orf43Q9BQ61 176 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF251Q9BRH9 671 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TBC1D10AQ9BXI6 508 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 GSDMCQ9BYG8 508 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 COPS7BQ9H9Q2 264 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 AKT3Q9Y243 479 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 VPS9D1Q9Y2B5 631 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CPSF1Q10570 1443 aaKnown RBP4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CCDC154A6NI56 674 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 E5RI56 91 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PLK4O00444 970 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TOR1AO14656 332 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TBX18O95935 607 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 TCF4P15884 667 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SLC7A1P30825 629 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CASP9P55211 416 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 SPCS3P61009 180 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 CYP20A1Q6UW02 462 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 ZBTB33Q86T24 672 aa4.38□□□□□ -1.71
SCN3A-209ENST00000639244 PLCZ1Q86YW0 608 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms