RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 CTC1Q2NKJ3 1217 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 KLHL38Q2WGJ6 581 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 MYLK3Q32MK0 819 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 VARS2Q5ST30 1063 aaKnown RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 JMJD6Q6NYC1 403 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 MARK2Q7KZI7 788 aaKnown RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 ZNF554Q86TJ5 538 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SFR1Q86XK3 245 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 GALNT12Q8IXK2 581 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SMYD4Q8IYR2 804 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 FAM169BQ8N8A8 192 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 KIAA0895Q8NCT3 520 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SH2D3AQ9BRG2 576 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SPON2Q9BUD6 331 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 MLPHQ9BV36 600 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SHCBP1LQ9BZQ2 653 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 TRIM2Q9C040 744 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 YIPF3Q9GZM5 350 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 OR10A4Q9H209 315 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SNX25Q9H3E2 840 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 RNPEPQ9H4A4 650 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 CCDC86Q9H6F5 360 aaKnown RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SARS2Q9NP81 518 aaKnown RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 XPNPEP1Q9NQW7 623 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 THAP1Q9NVV9 213 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 ADPRHL2Q9NX46 363 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 TAS2R7Q9NYW3 318 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 CPSF3Q9UKF6 684 aaKnown RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 CHMP2BQ9UQN3 213 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 COL1A2P08123 1366 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 A0A1W2PPL8 197 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 GPR89AB7ZAQ6 455 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 HSBP1L1C9JCN9 74 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 TRAPPC3O43617 180 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SMNDC1O75940 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 KLHL18O94889 574 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 LCA5LO95447 670 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 GPR89BP0CG08 455 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 ZNF286BP0CG31 522 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 CKMT1AP12532 417 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 ATF6P18850 670 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 MARK3P27448 753 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 GRK4P32298 578 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 NR1H2P55055 460 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 IFI35P80217 286 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 EMC2Q15006 297 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SGCAQ16586 387 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 UGP2Q16851 508 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 PPP1R26Q5T8A7 1209 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 GRAMD4Q6IC98 578 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 TRMT1LQ7Z2T5 733 aaKnown RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 DHX40Q8IX18 779 aaKnown RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 GUF1Q8N442 669 aaKnown RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 MAGEC3Q8TD91 643 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 MAIP1Q8WWC4 291 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 IFT81Q8WYA0 676 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 GATA6Q92908 595 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 METTL2AQ96IZ6 378 aaKnown RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 FAM193BQ96PV7 902 aaPredicted RBP8.6□□□□□ -1.03
NECAP1-214ENST00000639038 FIZ1Q96SL8 496 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 TBCDQ9BTW9 1192 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 PACSIN1Q9BY11 444 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 TMEM206Q9H813 350 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 C17orf75Q9HAS0 396 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SLC39A2Q9NP94 309 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 SPTLC3Q9NUV7 552 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 PTPN22Q9Y2R2 807 aa8.6□□□□□ -1.03
NECAP1-214ENST00000639038 IGKV6-21A0A0C4DH24 114 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 NUDT19A8MXV4 375 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 HAS3O00219 553 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 MEFVO15553 781 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 GAS2O43903 313 aaKnown RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 INHAP05111 366 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 PLS3P13797 630 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 EZRP15311 586 aaKnown RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 CHN1P15882 459 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 PAMP19021 973 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 CST5P28325 142 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 CASP5P51878 434 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 POLGP54098 1239 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 ATN1P54259 1190 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 EEF1A1P68104 462 aaKnown RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 CYP4F2P78329 520 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 S100A12P80511 92 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 EEF1A2Q05639 463 aaKnown RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 SULT2A1Q06520 285 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 CYP4F3Q08477 520 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 EEF1A1P5Q5VTE0 462 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 FOXR2Q6PJQ5 311 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 PIWIL3Q7Z3Z3 882 aaKnown RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 OR9A1PQ8NGU1 263 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 SLC5A11Q8WWX8 675 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 TRIM43Q96BQ3 446 aaPredicted RBP8.59□□□□□ -1.03
NECAP1-214ENST00000639038 PKP4Q99569 1192 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 BTBD2Q9BX70 525 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 IL19Q9UHD0 177 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 RWDD2AQ9UIY3 292 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 SLC8A2Q9UPR5 921 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 GAB2Q9UQC2 676 aa8.59□□□□□ -1.03
NECAP1-214ENST00000639038 LRCH1Q9Y2L9 728 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms