RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ZNF177Q13360 481 aaPredicted RBP22.41■■□□□ 1.18
SCN1B-206ENST00000638536 SLC18A3Q16572 532 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 FNDC3BQ53EP0 1204 aaKnown RBP22.41■■□□□ 1.18
SCN1B-206ENST00000638536 LRRC31Q6UY01 552 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 PRR23BQ6ZRT6 265 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 SLFN11Q7Z7L1 901 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 CEP192Q8TEP8 1941 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 TRIM11Q96F44 468 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 RPL10LQ96L21 214 aaKnown RBP22.41■■□□□ 1.18
SCN1B-206ENST00000638536 PEBP4Q96S96 227 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 FEM1AQ9BSK4 669 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 MKRN2Q9H000 416 aaKnown RBP22.41■■□□□ 1.18
SCN1B-206ENST00000638536 SPTLC3Q9NUV7 552 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 NDFIP2Q9NV92 336 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 SLCO3A1Q9UIG8 710 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 FZD10Q9ULW2 581 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 PLXND1Q9Y4D7 1925 aa22.41■■□□□ 1.18
SCN1B-206ENST00000638536 SSU72P8A0A1W2PR75 194 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 RPP40O75818 363 aaKnown RBP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 LRIG2O94898 1065 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 ATP5BP06576 529 aaKnown RBP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 EPHX1P07099 455 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 TPM1P09493 284 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 STK19P49842 368 aaPredicted RBP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 SCAPQ12770 1279 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 SIM2Q14190 667 aaPredicted RBP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 RNF219Q5W0B1 726 aaPredicted RBP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 CYP4V2Q6ZWL3 525 aaPredicted RBP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 FAM160A2Q8N612 972 aaPredicted RBP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 GAB3Q8WWW8 586 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 MRFAP1L1Q96HT8 127 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 NHEJ1Q9H9Q4 299 aaPredicted RBP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 GPATCH2LQ9NWQ4 482 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 BCCIPQ9P287 314 aaKnown RBP eCLIP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 SMG5Q9UPR3 1016 aaKnown RBP22.4■■□□□ 1.18
SCN1B-206ENST00000638536 SCINQ9Y6U3 715 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 DMXL1Q9Y485 3027 aa22.4■■□□□ 1.18
SCN1B-206ENST00000638536 A0A0D9SEW6 157 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 NPC1O15118 1278 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 GFRA3O60609 400 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 ALDH1A2O94788 518 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 CYP1A2P05177 515 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 TCF4P15884 667 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 PLK1P53350 603 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 COPAP53621 1224 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 CNGA4Q8IV77 575 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 PGBD3Q8N328 593 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 FNIP1Q8TF40 1166 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 MRGPRX1Q96LB2 322 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 SEMA4AQ9H3S1 761 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 ZNHIT6Q9NWK9 470 aaKnown RBP22.39■■□□□ 1.18
SCN1B-206ENST00000638536 PCSK1NQ9UHG2 260 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 ERVW-1Q9UQF0 538 aa22.39■■□□□ 1.18
SCN1B-206ENST00000638536 NYNRINQ9P2P1 1898 aaKnown RBP22.39■■□□□ 1.17
SCN1B-206ENST00000638536 CNR2P34972 360 aa22.39■■□□□ 1.17
SCN1B-206ENST00000638536 NRG1Q02297 640 aaPredicted RBP22.39■■□□□ 1.17
SCN1B-206ENST00000638536 CA9Q16790 459 aa22.39■■□□□ 1.17
SCN1B-206ENST00000638536 KBTBD6Q86V97 674 aa22.39■■□□□ 1.17
SCN1B-206ENST00000638536 PSMB7Q99436 277 aa22.39■■□□□ 1.17
SCN1B-206ENST00000638536 NUP85Q9BW27 656 aa22.39■■□□□ 1.17
SCN1B-206ENST00000638536 ZYG11BQ9C0D3 744 aa22.39■■□□□ 1.17
SCN1B-206ENST00000638536 DEF6Q9H4E7 631 aa22.39■■□□□ 1.17
SCN1B-206ENST00000638536 MRPL47Q9HD33 250 aaKnown RBP22.39■■□□□ 1.17
SCN1B-206ENST00000638536 PPARGC1AQ9UBK2 798 aaKnown RBP22.39■■□□□ 1.17
SCN1B-206ENST00000638536 TTC34A8MYJ7 566 aa22.38■■□□□ 1.17
SCN1B-206ENST00000638536 LRCH4O75427 683 aa22.38■■□□□ 1.17
SCN1B-206ENST00000638536 BCKDHBP21953 392 aa22.38■■□□□ 1.17
SCN1B-206ENST00000638536 MIPP30301 263 aa22.38■■□□□ 1.17
SCN1B-206ENST00000638536 OR1E1P30953 314 aa22.38■■□□□ 1.17
SCN1B-206ENST00000638536 ECT2LQ008S8 904 aa22.38■■□□□ 1.17
SCN1B-206ENST00000638536 TSR1Q2NL82 804 aaKnown RBP22.38■■□□□ 1.17
SCN1B-206ENST00000638536 ACBD5Q5T8D3 534 aaPredicted RBP22.38■■□□□ 1.17
SCN1B-206ENST00000638536 RWDD4Q6NW29 188 aaKnown RBP22.38■■□□□ 1.17
SCN1B-206ENST00000638536 CACUL1Q86Y37 369 aa22.38■■□□□ 1.17
SCN1B-206ENST00000638536 DCLK2Q8N568 766 aa22.38■■□□□ 1.17
SCN1B-206ENST00000638536 AKR1B10O60218 316 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 MOCS3O95396 460 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 RHOCP08134 193 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 SEMA3BQ13214 749 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 SLC12A1Q13621 1099 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 STARD3Q14849 445 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 MAP7D1Q3KQU3 841 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 CEP68Q76N32 757 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 NLRP14Q86W24 1093 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 CPNE8Q86YQ8 564 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 OR7D4Q8NG98 312 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 PRSS16Q9NQE7 514 aa22.37■■□□□ 1.17
SCN1B-206ENST00000638536 SNAP91O60641 907 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 ASLP04424 464 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 VAV1P15498 845 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 GLDCP23378 1020 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 P2RY2P41231 377 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 CAMK2GQ13555 558 aaPredicted RBP22.36■■□□□ 1.17
SCN1B-206ENST00000638536 EFHC2Q5JST6 749 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 TMPRSS6Q8IU80 811 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 CCDC42Q96M95 316 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 SNRNP25Q9BV90 132 aaKnown RBP22.36■■□□□ 1.17
SCN1B-206ENST00000638536 MUC3BQ9H195 1237 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 DNAI1Q9UI46 699 aa22.36■■□□□ 1.17
SCN1B-206ENST00000638536 MBD1Q9UIS9 605 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms