RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 EIF2B4Q9UI10 523 aaKnown RBP18.26■□□□□ 0.51
PNKP-230ENST00000638016 DOCK4Q8N1I0 1966 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 METTL12A8MUP2 240 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 MID1O15344 667 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 MOCS3O95396 460 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 DNTTP04053 509 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 C7P10643 843 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 MMP8P22894 467 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 OXTRP30559 389 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 SCNN1AP37088 669 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 NOVA1P51513 510 aaKnown RBP18.25■□□□□ 0.51
PNKP-230ENST00000638016 ATP11AP98196 1134 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 GFPT1Q06210 699 aaPredicted RBP18.25■□□□□ 0.51
PNKP-230ENST00000638016 C15orf59Q2T9L4 293 aaPredicted RBP18.25■□□□□ 0.51
PNKP-230ENST00000638016 SLC25A52Q3SY17 297 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 SYCP2LQ5T4T6 812 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 DAB2IPQ5VWQ8 1189 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 LAYNQ6UX15 382 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 BNIPLQ7Z465 357 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 MMAAQ8IVH4 418 aaKnown RBP18.25■□□□□ 0.51
PNKP-230ENST00000638016 MINDY1Q8N5J2 469 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 DEFB124Q8NES8 71 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 CEP76Q8TAP6 659 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 DNASE2BQ8WZ79 361 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 PTPRN2Q92932 1015 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 PGAP3Q96FM1 320 aaPredicted RBP18.25■□□□□ 0.51
PNKP-230ENST00000638016 ERGIC2Q96RQ1 377 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 MPP6Q9NZW5 540 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 OR51B4Q9Y5P0 310 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 PCNX2A6NKB5 2137 aa18.25■□□□□ 0.51
PNKP-230ENST00000638016 ITIH6Q6UXX5 1313 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 A0A1W2PP55 124 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 LRRC10BA6NIK2 292 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 PLK4O00444 970 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 SRPRAP08240 638 aaKnown RBP18.24■□□□□ 0.51
PNKP-230ENST00000638016 UNGP13051 313 aaPredicted RBP18.24■□□□□ 0.51
PNKP-230ENST00000638016 DPP6P42658 865 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 PSMD8P48556 350 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 PTP4A2Q12974 167 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 GRIK2Q13002 908 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 CDO1Q16878 200 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 WDR45BQ5MNZ6 344 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 BRMS1LQ5PSV4 323 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 TTC39BQ5VTQ0 682 aaPredicted RBP18.24■□□□□ 0.51
PNKP-230ENST00000638016 RNF219Q5W0B1 726 aaPredicted RBP18.24■□□□□ 0.51
PNKP-230ENST00000638016 TFAP2DQ7Z6R9 452 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 ZNF677Q86XU0 584 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 ANKRD20A12PQ8NF67 263 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 CADM4Q8NFZ8 388 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 FAM129BQ96TA1 746 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 MAGEB5Q9BZ81 275 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 PABPC3Q9H361 631 aaKnown RBP18.24■□□□□ 0.51
PNKP-230ENST00000638016 RRN3Q9NYV6 651 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 PLXNA2O75051 1894 aa18.24■□□□□ 0.51
PNKP-230ENST00000638016 ACACBO00763 2458 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.23■□□□□ 0.51
PNKP-230ENST00000638016 FAM47DPA6NHR8 397 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 ARHGAP33O14559 1287 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 SNAP91O60641 907 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 SEMA4FO95754 770 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 RDXP35241 583 aaKnown RBP18.23■□□□□ 0.51
PNKP-230ENST00000638016 PLK1P53350 603 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 ATXN3P54252 364 aaPredicted RBP18.23■□□□□ 0.51
PNKP-230ENST00000638016 BNC1Q01954 994 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 ZNF177Q13360 481 aaPredicted RBP18.23■□□□□ 0.51
PNKP-230ENST00000638016 CST6Q15828 149 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 C5orf22Q49AR2 442 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 GANCQ8TET4 914 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 FRS2Q8WU20 508 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 RXFP2Q8WXD0 754 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 PSMB7Q99436 277 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 FEM1AQ9BSK4 669 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 BTBD1Q9H0C5 482 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 FBRSQ9HAH7 460 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 SEPT11Q9NVA2 429 aaKnown RBP18.23■□□□□ 0.51
PNKP-230ENST00000638016 FBXL12Q9NXK8 326 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 VPS28Q9UK41 221 aa18.23■□□□□ 0.51
PNKP-230ENST00000638016 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.23■□□□□ 0.51
PNKP-230ENST00000638016 TMEM131Q92545 1883 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 CHD8Q9HCK8 2581 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 EDDM13A0A1B0GTR0 161 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 E9PAM4 449 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 FSBPO95073 299 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 ARID5BQ14865 1188 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 CLEC16AQ2KHT3 1053 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 CCDC14Q49A88 953 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 TTC31Q49AM3 519 aaPredicted RBP18.22■□□□□ 0.51
PNKP-230ENST00000638016 SND1Q7KZF4 910 aaKnown RBP eCLIP18.22■□□□□ 0.51
PNKP-230ENST00000638016 AADATQ8N5Z0 425 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 KDM1BQ8NB78 822 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 MSANTD4Q8NCY6 345 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 C1orf216Q8TAB5 229 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 BIRC7Q96CA5 298 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 CNTNAP3BQ96NU0 1288 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 FUCA2Q9BTY2 467 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 CNTNAP3Q9BZ76 1288 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 NEUROG2Q9H2A3 272 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 IL21RQ9HBE5 538 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 DOCK9Q9BZ29 2069 aa18.22■□□□□ 0.51
PNKP-230ENST00000638016 SPEGQ15772 3267 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms