RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 TP53BP1Q12888 1972 aaPredicted RBP16.97■□□□□ 0.31
CLN3-255ENST00000637100 KCNU1A8MYU2 1149 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 TLR4O00206 839 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 SLC7A4O43246 635 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 RFPL3O75679 317 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 MOCS3O95396 460 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 LDOC1O95751 146 aaPredicted RBP16.97■□□□□ 0.31
CLN3-255ENST00000637100 MZF1P28698 734 aaPredicted RBP16.97■□□□□ 0.31
CLN3-255ENST00000637100 MARSP56192 900 aaKnown RBP16.97■□□□□ 0.31
CLN3-255ENST00000637100 OVGP1Q12889 678 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 SMYD5Q6GMV2 418 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 TTI2Q6NXR4 508 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 ARHGEF19Q8IW93 802 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 STK40Q8N2I9 435 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 PPM1KQ8N3J5 372 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 OXR1Q8N573 874 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 CNDP2Q96KP4 475 aaKnown RBP16.97■□□□□ 0.31
CLN3-255ENST00000637100 BTN2A3PQ96KV6 586 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 MIS12Q9H081 205 aa16.97■□□□□ 0.31
CLN3-255ENST00000637100 FAM47DPA6NHR8 397 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 TK2O00142 265 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 PLK4O00444 970 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 SMC2O95347 1197 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 CALCAP01258 141 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 ITGAVP06756 1048 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 CD44P16070 742 aaKnown RBP16.96■□□□□ 0.31
CLN3-255ENST00000637100 TACR2P21452 398 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 EIF2S3P41091 472 aaKnown RBP16.96■□□□□ 0.31
CLN3-255ENST00000637100 PPP1R2P41236 205 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 ARRB1P49407 418 aaPredicted RBP16.96■□□□□ 0.31
CLN3-255ENST00000637100 SULT2A1Q06520 285 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 NAPEPLDQ6IQ20 393 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 SPATS2Q86XZ4 545 aaKnown RBP16.96■□□□□ 0.31
CLN3-255ENST00000637100 TRIM59Q8IWR1 403 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 LGI2Q8N0V4 545 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 GANCQ8TET4 914 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 NXPE2Q96DL1 559 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 SPAG5Q96R06 1193 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 THAP9Q9H5L6 903 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 PRORYQ9H606 182 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 POPDC2Q9HBU9 364 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 GDPD2Q9HCC8 539 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLN3-255ENST00000637100 CYTH4Q9UIA0 394 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 DMTF1Q9Y222 760 aa16.96■□□□□ 0.31
CLN3-255ENST00000637100 KALRNO60229 2985 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 CBX4O00257 560 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 PSMA7O14818 248 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 PLRG1O43660 514 aaKnown RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 ATP9BO43861 1147 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 TRUB2O95900 331 aaKnown RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 HNF1BP35680 557 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 PPP2CBP62714 309 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 YWHAZP63104 245 aaKnown RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 PPP2CAP67775 309 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 BNIP3Q12983 259 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 DNAJC3Q13217 504 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 C5orf22Q49AR2 442 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 ZC3H12AQ5D1E8 599 aaKnown RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 CXorf57Q6NSI4 855 aaKnown RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 DENND1BQ6P3S1 775 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 RRAGAQ7L523 313 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 TRIM69Q86WT6 500 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 CCDC117Q8IWD4 279 aaPredicted RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 CCAR2Q8N163 923 aaKnown RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 LSM14AQ8ND56 463 aaKnown RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 OR14C36Q8NHC7 312 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 ADAM32Q8TC27 787 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 SMARCE1Q969G3 411 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 CRELD1Q96HD1 420 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 SERAC1Q96JX3 654 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 RPL10LQ96L21 214 aaKnown RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 AASDHPPTQ9NRN7 309 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 PPM1HQ9ULR3 514 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 OR51B4Q9Y5P0 310 aa16.95■□□□□ 0.3
CLN3-255ENST00000637100 NYNRINQ9P2P1 1898 aaKnown RBP16.95■□□□□ 0.3
CLN3-255ENST00000637100 PPP1R3GB7ZBB8 358 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 ALOX15BO15296 676 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 TLX3O43711 291 aaPredicted RBP16.94■□□□□ 0.3
CLN3-255ENST00000637100 APOEP02649 317 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 GLI1P08151 1106 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 JUPP14923 745 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 ABCB4P21439 1286 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 BMP6P22004 513 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 PSMD8P48556 350 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 STK19P49842 368 aaPredicted RBP16.94■□□□□ 0.3
CLN3-255ENST00000637100 OXCT1P55809 520 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 PITX1P78337 314 aaPredicted RBP16.94■□□□□ 0.3
CLN3-255ENST00000637100 CETN1Q12798 172 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 PROX2Q3B8N5 592 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 SLC45A4Q5BKX6 768 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 TTC39BQ5VTQ0 682 aaPredicted RBP16.94■□□□□ 0.3
CLN3-255ENST00000637100 RAP1GAP2Q684P5 730 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 EID2Q8N6I1 236 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 SNIP1Q8TAD8 396 aaKnown RBP16.94■□□□□ 0.3
CLN3-255ENST00000637100 ZNF606Q8WXB4 792 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 FAM149B1Q96BN6 582 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 UBL7Q96S82 380 aaPredicted RBP16.94■□□□□ 0.3
CLN3-255ENST00000637100 SARDHQ9UL12 918 aa16.94■□□□□ 0.3
CLN3-255ENST00000637100 A0A1B0GVM2 712 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms