RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 IQCB1Q15051 598 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SMAD1Q15797 465 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 CNGA3Q16281 694 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ALG11Q2TAA5 492 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 KBTBD12Q3ZCT8 623 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ZACNQ401N2 412 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 NAA16Q6N069 864 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 JMJD6Q6NYC1 403 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 OLFML1Q6UWY5 402 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SLC30A10Q6XR72 485 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 GBP6Q6ZN66 633 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SPATA31D4Q6ZUB0 917 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 INTS8Q75QN2 995 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ZNF280BQ86YH2 543 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 CCDC13Q8IYE1 715 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 TMEM57Q8N5G2 664 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 LINC00469Q8N7U9 141 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 OR6C4Q8NGE1 309 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 GPR150Q8NGU9 434 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SLC9A6Q92581 669 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 CABS1Q96KC9 395 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 PPP1R13BQ96KQ4 1090 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DACH2Q96NX9 599 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 BBC3Q96PG8 261 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 FNBP1Q96RU3 617 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 OSBPL9Q96SU4 736 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ATP6V0BQ99437 205 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SORBS1Q9BX66 1292 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 EIF2AQ9BY44 585 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 LRRCC1Q9C099 1032 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 MS4A7Q9GZW8 240 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 PDCL3Q9H2J4 239 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 TNMDQ9H2S6 317 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SMOC2Q9H3U7 446 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DDX18Q9NVP1 670 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DONSONQ9NYP3 566 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 TBC1D14Q9P2M4 693 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DNMT3BQ9UBC3 853 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 UBA2Q9UBT2 640 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DKK4Q9UBT3 224 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ITGB1BP2Q9UKP3 347 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 MTUS1Q9ULD2 1270 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 MAGED2Q9UNF1 606 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 TMED5Q9Y3A6 229 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 JRKLQ9Y4A0 524 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DTNAQ9Y4J8 743 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SNX8Q9Y5X2 465 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 AP1M2Q9Y6Q5 423 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DDX49Q9Y6V7 483 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 FPGT-TNNI3KV9GXZ4 949 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ARPC4-TTLL3A0A0A6YYG9 625 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 LOC102723971A0A1B0GUV8 181 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 CLRN2A0PK11 232 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 LRRC72A6NJI9 287 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 TMCO5BA8MYB1 307 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 K7EPI3 171 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 RNASET2O00584 256 aaKnown RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 UBE2CO00762 179 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 RNF113AO15541 343 aaKnown RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 THAP12O43422 761 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 SMPD2O60906 423 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 VPS4BO75351 444 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 ZNF254O75437 659 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 ERN1O75460 977 aaKnown RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 DAB1O75553 588 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 ERAL1O75616 437 aaKnown RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 NCR1O76036 304 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 SLITRK3O94933 977 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 EPN2O95208 641 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 FGFR1OPO95684 399 aaKnown RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 HLA-DOAP06340 250 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 ATP5BP06576 529 aaKnown RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 RHOXF2BP0C7M4 288 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 MYL4P12829 197 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 TMEM11P17152 192 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 IFNAR1P17181 557 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 PTPN2P17706 415 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 ARF4P18085 180 aaPredicted RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 CHRM3P20309 590 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 LRPAP1P30533 357 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 SOX6P35712 828 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 HSD17B2P37059 387 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 MTIF2P46199 727 aaKnown RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 ETV1P50549 477 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 DGKEP52429 567 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 VAV2P52735 878 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 ITGA8P53708 1063 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 ELLP55199 621 aaPredicted RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 YBEYP58557 167 aaPredicted RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 STARD6P59095 220 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 LILRA4P59901 499 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 VAMP2P63027 116 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 CXADRP78310 365 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 SARNPP82979 210 aaKnown RBP3.13□□□□□ -1.91
PSPC1-208ENST00000635562 COG7P83436 770 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 HTD2P86397 168 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 C17orf67Q0P5P2 114 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 TRDNQ13061 729 aa3.13□□□□□ -1.91
PSPC1-208ENST00000635562 ARHGEF7Q14155 803 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms