RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SYN3O14994 580 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TADA2AO75478 443 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TIPRLO75663 272 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 OAZ2O95190 189 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 FYNP06241 537 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 APRTP07741 180 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 VIMP08670 466 aaKnown RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 GRK4P32298 578 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 GRIK1P39086 918 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CASP2P42575 452 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 YWHAGP61981 247 aaKnown RBP eCLIP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 COG7P83436 770 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 DSC1Q08554 894 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 SEMA5AQ13591 1074 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 DPYSQ14117 519 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 SEPT6Q14141 434 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 PARP6Q2NL67 630 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 PAN2Q504Q3 1202 aaKnown RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 WDR45BQ5MNZ6 344 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 BRMS1LQ5PSV4 323 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 BSPRYQ5W0U4 402 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TRAF7Q6Q0C0 670 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 SRLQ86TD4 932 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 RTN4RL1Q86UN2 441 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 ANKRD13BQ86YJ7 626 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CCNJLQ8IV13 435 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 ABI1Q8IZP0 508 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 ARHGAP18Q8N392 663 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TAB3Q8N5C8 712 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CCDC110Q8TBZ0 833 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CKAP2Q8WWK9 683 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 APBB2Q92870 758 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 FUBP3Q96I24 572 aaKnown RBP eCLIP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 ZNF317Q96PQ6 595 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 WDR6Q9NNW5 1121 aaKnown RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 EIF2B3Q9NR50 452 aaKnown RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 VPS45Q9NRW7 570 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CHMP2BQ9UQN3 213 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 FAM169AQ9Y6X4 670 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TOR1BO14657 336 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 DCLK1O15075 740 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 ASMTLO95671 621 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 CPP00450 1065 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 INHBAP08476 426 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 GCAP28676 217 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 SSTR1P30872 391 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 BMP8BP34820 402 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 OR1G1P47890 313 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 AP1B1Q10567 949 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 IFRD2Q12894 506 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-230ENST00000634433 PRKD1Q15139 912 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-230ENST00000634433 ANKRD20A2Q5SQ80 823 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 ANKRD20A1Q5TYW2 823 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 ANKRD20A3Q5VUR7 823 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 BTBD8Q5XKL5 378 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 LRRC8DQ7L1W4 858 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 GPRIN1Q7Z2K8 1008 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 COLGALT2Q8IYK4 626 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 CCNYQ8ND76 341 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 HASPINQ8TF76 798 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 SEC16BQ96JE7 1060 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 CABS1Q96KC9 395 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 MAGEB18Q96M61 343 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 PAFAH2Q99487 392 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 DHRS4Q9BTZ2 278 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 C2orf49Q9BVC5 232 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-230ENST00000634433 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.34□□□□□ -1.231e-5■■■□□ 18
BRCA1-230ENST00000634433 ZC3H7BQ9UGR2 993 aaKnown RBP7.34□□□□□ -1.23
BRCA1-230ENST00000634433 PCDHB7Q9Y5E2 793 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 KIAA0100Q14667 2235 aaKnown RBP7.34□□□□□ -1.23
BRCA1-230ENST00000634433 MFSD11O43934 449 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 ZWINTO95229 277 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 MYCLP1P12525 358 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-230ENST00000634433 ERCC2P18074 760 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 CACNA2D1P54289 1103 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 PITX1P78337 314 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-230ENST00000634433 NFKB2Q00653 900 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 GAD2Q05329 585 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 ZNF33AQ06730 810 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 SEMA3BQ13214 749 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 GALEQ14376 348 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 SPARCL1Q14515 664 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 SEPT7Q16181 437 aaKnown RBP7.34□□□□□ -1.23
BRCA1-230ENST00000634433 C1orf122Q6ZSJ8 110 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 CYS1Q717R9 158 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 BHLHA9Q7RTU4 235 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 LRRTM3Q86VH5 581 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 COLGALT1Q8NBJ5 622 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 CCDC197Q8NCU1 140 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 OR10T2Q8NGX3 314 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 SEPT8Q92599 483 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 GRAMD1AQ96CP6 724 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 P2RY11Q96G91 374 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 HAPLN3Q96S86 360 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 VAT1Q99536 393 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 YIPF4Q9BSR8 244 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 NAT9Q9BTE0 207 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 OXCT2Q9BYC2 517 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-230ENST00000634433 ZCWPW1Q9H0M4 648 aa7.34□□□□□ -1.23
BRCA1-230ENST00000634433 CDH19Q9H159 772 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms