RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TNFSF14O43557 240 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 CD27P26842 260 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 GRK6P43250 576 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 GRIA4P48058 902 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 SLC11A2P49281 568 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 C21orf59P57076 290 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 ST8SIA6P61647 398 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 ZBTB16Q05516 673 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 PRAMEF14Q5SWL7 426 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 PIK3R6Q5UE93 754 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 ZNF776Q68DI1 518 aaPredicted RBP16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 KIAA0907Q7Z7F0 614 aaPredicted RBP16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 NOP9Q86U38 636 aaKnown RBP16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 TMEM35BQ8NCS4 154 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 IGSF8Q969P0 613 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 PPP1R13BQ96KQ4 1090 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 SLC4A5Q9BY07 1137 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 FBRSQ9HAH7 460 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 SGK2Q9HBY8 427 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 CYTH4Q9UIA0 394 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 STOML2Q9UJZ1 356 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 CABIN1Q9Y6J0 2220 aa16.09■□□□□ 0.17
SNRNP48-203ENST00000634363 PLXNA2O75051 1894 aa16.08■□□□□ 0.17
SNRNP48-203ENST00000634363 TP53BP1Q12888 1972 aaPredicted RBP16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 CBFA2T2O43439 604 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 LSM8O95777 96 aaKnown RBP16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 LATS1O95835 1130 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 FERP16591 822 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 SLC6A4P31645 630 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 RPL34P49207 117 aaKnown RBP16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 CCT8P50990 548 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 SOWAHCQ53LP3 525 aaPredicted RBP16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 DHRS13Q6UX07 377 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 MFN1Q8IWA4 741 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 UNC45BQ8IWX7 931 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 MSANTD4Q8NCY6 345 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 FAM149B1Q96BN6 582 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 TRIM62Q9BVG3 475 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 OSGEPQ9NPF4 335 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 FBXL12Q9NXK8 326 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 MYO6Q9UM54 1294 aa16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 MUC22E2RYF6 1773 aaPredicted RBP16.08■□□□□ 0.16
SNRNP48-203ENST00000634363 ACSL4O60488 711 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 RNASEH1O60930 286 aaKnown RBP16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 GABBR2O75899 941 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 LTFP02788 710 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 MMEP08473 750 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 TBX4P57082 545 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 CDR2Q01850 454 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 KIAA0895LQ68EN5 471 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 TMEM110Q86TL2 294 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 GATAD2AQ86YP4 633 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 SCUBE3Q8IX30 993 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 CARNMT1Q8N4J0 409 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 WDTC1Q8N5D0 677 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 CLEC4CQ8WTT0 213 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 CPXM1Q96SM3 734 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 OMDQ99983 421 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 ACE2Q9BYF1 805 aaPredicted RBP16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 XPO4Q9C0E2 1151 aaKnown RBP16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 FTSJ1Q9UET6 329 aa16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 NOCTQ9UK39 431 aaKnown RBP16.07■□□□□ 0.16
SNRNP48-203ENST00000634363 LRRC53A6NM62 1247 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 PAPSS1O43252 624 aaPredicted RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 PCDHGA12O60330 932 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 SIN3BO75182 1162 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 DKK1O94907 266 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 CDH5P33151 784 aaPredicted RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 CTSKP43235 329 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 GALCP54803 685 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 RPS24P62847 133 aaKnown RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 PTPN20Q4JDL3 420 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 FAM133BQ5BKY9 247 aaKnown RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 FIGNQ5HY92 759 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 MPP7Q5T2T1 576 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 NUGGCQ68CJ6 796 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 MSANTD2Q6P1R3 559 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 TRIM72Q6ZMU5 477 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 MMAAQ8IVH4 418 aaKnown RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 CCDC117Q8IWD4 279 aaPredicted RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 CFAP52Q8N1V2 620 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 FIBINQ8TAL6 211 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 SLC20A1Q8WUM9 679 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 BAP1Q92560 729 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 IQCDQ96DY2 449 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 SLC6A18Q96N87 628 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 EDEM3Q9BZQ6 932 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 RSPH9Q9H1X1 276 aaPredicted RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 NEUROG2Q9H2A3 272 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 PABPC3Q9H361 631 aaKnown RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 AASDHPPTQ9NRN7 309 aa16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 SEPT11Q9NVA2 429 aaKnown RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 URB1O60287 2271 aaKnown RBP16.06■□□□□ 0.16
SNRNP48-203ENST00000634363 DSPP15924 2871 aaKnown RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 A0A1W2PP55 124 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 TYW5A2RUC4 315 aaKnown RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 EIF4E1BA6NMX2 242 aaKnown RBP16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 CAPN9O14815 690 aa16.05■□□□□ 0.16
SNRNP48-203ENST00000634363 MID1O15344 667 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms