RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 KLK6Q92876 244 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 TTC17Q96AE7 1141 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 GRAMD1AQ96CP6 724 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 TWNKQ96RR1 684 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 PANK2Q9BZ23 570 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 SYNDIG1Q9H7V2 258 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 PNPLA8Q9NP80 782 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 SFMBT1Q9UHJ3 866 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 SLCO3A1Q9UIG8 710 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 DMTF1Q9Y222 760 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 CEP83Q9Y592 693 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 TDRD6O60522 2096 aaKnown RBP12.36□□□□□ -0.43
CHD2-218ENST00000629346 UBE4BO95155 1302 aa12.36□□□□□ -0.43
CHD2-218ENST00000629346 EDDM13A0A1B0GTR0 161 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 GOLGA6L7A0A1B0GV03 622 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 FRMD3A2A2Y4 597 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 TARSL2A2RTX5 802 aaKnown RBP12.35□□□□□ -0.43
CHD2-218ENST00000629346 NEMP2A6NFY4 417 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 SLC31A1O15431 190 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 LZTS3O60299 673 aaPredicted RBP12.35□□□□□ -0.43
CHD2-218ENST00000629346 CUTAO60888 179 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 VNN1O95497 513 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 ITGA2BP08514 1039 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 P4HA1P13674 534 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 PRLRP16471 622 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 TRIM21P19474 475 aaKnown RBP12.35□□□□□ -0.43
CHD2-218ENST00000629346 MZF1P28698 734 aaPredicted RBP12.35□□□□□ -0.43
CHD2-218ENST00000629346 DRD3P35462 400 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 NUMBP49757 651 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 SETMARQ53H47 684 aaPredicted RBP12.35□□□□□ -0.43
CHD2-218ENST00000629346 SPOPLQ6IQ16 392 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 MMS22LQ6ZRQ5 1243 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 VASH2Q86V25 355 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 MFN1Q8IWA4 741 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 ARHGAP18Q8N392 663 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 PDILTQ8N807 584 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 XXYLT1Q8NBI6 393 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
CHD2-218ENST00000629346 DUSP16Q9BY84 665 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 USP29Q9HBJ7 922 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 AGPAT3Q9NRZ7 376 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 INTS6Q9UL03 887 aaKnown RBP12.35□□□□□ -0.43
CHD2-218ENST00000629346 ERVW-1Q9UQF0 538 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 KIF26BQ2KJY2 2108 aa12.35□□□□□ -0.43
CHD2-218ENST00000629346 NBASA2RRP1 2371 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 CCDC187A0A096LP49 1063 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 SCAMP1O15126 338 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 TGFB1I1O43294 461 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 KRT38O76015 456 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 ASLP04424 464 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 VAV1P15498 845 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 NUDT1P36639 197 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 ZNF445P59923 1031 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 DRAP1Q14919 205 aaPredicted RBP12.34□□□□□ -0.43
CHD2-218ENST00000629346 NCAPHQ15003 741 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
CHD2-218ENST00000629346 ATL3Q6DD88 541 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
CHD2-218ENST00000629346 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 CCDC65Q8IXS2 484 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 CARNMT1Q8N4J0 409 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 OR13H1Q8NG92 308 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 ZNF564Q8TBZ8 553 aaPredicted RBP12.34□□□□□ -0.43
CHD2-218ENST00000629346 PLEKHO2Q8TD55 490 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 RPL10LQ96L21 214 aaKnown RBP12.34□□□□□ -0.43
CHD2-218ENST00000629346 DUSP23Q9BVJ7 150 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 TNMDQ9H2S6 317 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 CUEDC2Q9H467 287 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 FZD3Q9NPG1 666 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 GEMIN8Q9NWZ8 242 aaKnown RBP12.34□□□□□ -0.43
CHD2-218ENST00000629346 DNAJC28Q9NX36 388 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 PCDHGA4Q9Y5G9 962 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 ABCA12Q86UK0 2595 aa12.34□□□□□ -0.43
CHD2-218ENST00000629346 DOCK9Q9BZ29 2069 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 MSI1O43347 362 aaKnown RBP12.33□□□□□ -0.44
CHD2-218ENST00000629346 PLRG1O43660 514 aaKnown RBP12.33□□□□□ -0.44
CHD2-218ENST00000629346 SLFN14P0C7P3 912 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 MLLT3P42568 568 aaPredicted RBP12.33□□□□□ -0.44
CHD2-218ENST00000629346 PKP1Q13835 747 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 ARID5BQ14865 1188 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 E2F4Q16254 413 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 SGSM1Q2NKQ1 1148 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 MANEAQ5SRI9 462 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 PERM1Q5SV97 790 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 PPP1R26Q5T8A7 1209 aaPredicted RBP12.33□□□□□ -0.44
CHD2-218ENST00000629346 PIK3R6Q5UE93 754 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 RNF219Q5W0B1 726 aaPredicted RBP12.33□□□□□ -0.44
CHD2-218ENST00000629346 TRIM69Q86WT6 500 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 ZSCAN1Q8NBB4 408 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 FIBINQ8TAL6 211 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 RNF139Q8WU17 664 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 EDEM1Q92611 657 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 PTPRN2Q92932 1015 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 LMLNQ96KR4 655 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 NOX5Q96PH1 765 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 NT5C1AQ9BXI3 368 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 LRRC27Q9C0I9 530 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 STOML2Q9UJZ1 356 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 CFAP45Q9UL16 551 aa12.33□□□□□ -0.44
CHD2-218ENST00000629346 COL27A1Q8IZC6 1860 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms