RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 DNAJC24Q6P3W2 148 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 TRMT11Q7Z4G4 463 aaKnown RBP11.45□□□□□ -0.58
DDX41-219ENST00000629036 CHPFQ8IZ52 775 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 APCDD1Q8J025 514 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 FRMD1Q8N878 549 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 FAM172AQ8WUF8 416 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 CPLX3Q8WVH0 158 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 NTAN1Q96AB6 310 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 ZC3H10Q96K80 434 aaKnown RBP11.45□□□□□ -0.58
DDX41-219ENST00000629036 C1orf74Q96LT6 269 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 PEBP4Q96S96 227 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 PSMB7Q99436 277 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 TPSD1Q9BZJ3 242 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 MKRN2Q9H000 416 aaKnown RBP11.45□□□□□ -0.58
DDX41-219ENST00000629036 WDCPQ9H6R7 721 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 MBD1Q9UIS9 605 aaPredicted RBP11.45□□□□□ -0.58
DDX41-219ENST00000629036 TBC1D30Q9Y2I9 924 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 LUC7L2Q9Y383 392 aaKnown RBP11.45□□□□□ -0.58
DDX41-219ENST00000629036 CEP295Q9C0D2 2601 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 SHROOM3Q8TF72 1996 aa11.45□□□□□ -0.58
DDX41-219ENST00000629036 E9PAM4 449 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 DCLK1O15075 740 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 CBFA2T2O43439 604 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 DLDP09622 509 aaKnown RBP11.44□□□□□ -0.58
DDX41-219ENST00000629036 HLA-EP13747 358 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 P2RY2P41231 377 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 KBTBD6Q86V97 674 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 NLRP14Q86W24 1093 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 CARNMT1Q8N4J0 409 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 ZNF366Q8N895 744 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 FNIP1Q8TF40 1166 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 ARHGEF26Q96DR7 871 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 ERLEC1Q96DZ1 483 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 MRGPRX1Q96LB2 322 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 RPRD1AQ96P16 312 aaPredicted RBP11.44□□□□□ -0.58
DDX41-219ENST00000629036 CNPY3Q9BT09 278 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 SELENOOQ9BVL4 669 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 CIPCQ9C0C6 399 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 OSBPL2Q9H1P3 480 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 DUSP15Q9H1R2 295 aaPredicted RBP11.44□□□□□ -0.58
DDX41-219ENST00000629036 TMEM51Q9NW97 253 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 ADAMTS1Q9UHI8 967 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 GMEB2Q9UKD1 530 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 ANGPTL2Q9UKU9 493 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 BZW2Q9Y6E2 419 aaKnown RBP11.44□□□□□ -0.58
DDX41-219ENST00000629036 SPEGQ15772 3267 aa11.44□□□□□ -0.58
DDX41-219ENST00000629036 LRRK1Q38SD2 2015 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 TMEM131Q92545 1883 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 C10orf142B7Z368 130 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 TIMM44O43615 452 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 RPP40O75818 363 aaKnown RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 CDH18Q13634 790 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 TRIM14Q14142 442 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 PLK5Q496M5 336 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 TDRD12Q587J7 1177 aaKnown RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 RABGAP1LQ5R372 815 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 PPP1R2P3Q6NXS1 205 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 NUDT18Q6ZVK8 323 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 DRC7Q8IY82 874 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 FAM160A2Q8N612 972 aaPredicted RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 ZNF557Q8N988 423 aaPredicted RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 KDM1BQ8NB78 822 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 HMGB4Q8WW32 186 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 RNF34Q969K3 372 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 VOPP1Q96AW1 172 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 FEM1AQ9BSK4 669 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 SIK2Q9H0K1 926 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 MTG2Q9H4K7 406 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 NOL6Q9H6R4 1146 aaKnown RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 ABHD10Q9NUJ1 306 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 NDFIP2Q9NV92 336 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 PARVAQ9NVD7 372 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 MPP6Q9NZW5 540 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 USP36Q9P275 1121 aaKnown RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 PPARGC1AQ9UBK2 798 aaKnown RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 SLC12A6Q9UHW9 1150 aa11.43□□□□□ -0.58
DDX41-219ENST00000629036 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.43□□□□□ -0.584e-7■■■□□ 16.3
DDX41-219ENST00000629036 ASCC3Q8N3C0 2202 aaKnown RBP11.43□□□□□ -0.58
DDX41-219ENST00000629036 SETXQ7Z333 2677 aaKnown RBP11.42□□□□□ -0.58
DDX41-219ENST00000629036 IGHV1OR15-9A0A0B4J2B8 117 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 TYW5A2RUC4 315 aaKnown RBP11.42□□□□□ -0.58
DDX41-219ENST00000629036 SLC30A4O14863 429 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 CLDN11O75508 207 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 ZMPSTE24O75844 475 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 LRIG2O94898 1065 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 IGLV3-19P01714 112 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 CYP1A2P05177 515 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 TCF4P15884 667 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 EIF4A3P38919 411 aaKnown RBP11.42□□□□□ -0.58
DDX41-219ENST00000629036 NUMBP49757 651 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 STK19P49842 368 aaPredicted RBP11.42□□□□□ -0.58
DDX41-219ENST00000629036 CDH4P55283 916 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 SLC12A1Q13621 1099 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 SIM2Q14190 667 aaPredicted RBP11.42□□□□□ -0.58
DDX41-219ENST00000629036 DAB2IPQ5VWQ8 1189 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 PMS2CLQ68D20 193 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 LAIR1Q6GTX8 287 aa11.42□□□□□ -0.58
DDX41-219ENST00000629036 SND1Q7KZF4 910 aaKnown RBP eCLIP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms