RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 DAOAP59103 153 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 UBAP2LQ14157 1087 aaKnown RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 GALNT3Q14435 633 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 ZNF470Q6ECI4 717 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 NPWQ8N729 165 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 GSDMBQ8TAX9 411 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 HSFY1Q96LI6 401 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 MUC3BQ9H195 1237 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 IL1RL2Q9HB29 575 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 HMX1Q9NP08 348 aaPredicted RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 PHIPQ8WWQ0 1821 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 MAP1BP46821 2468 aaKnown RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 C9JVG2 144 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 AIM2O14862 343 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 INHAP05111 366 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 GARSP41250 739 aaKnown RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 LPIN1Q14693 890 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 C17orf99Q6UX52 265 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 DENND1CQ8IV53 801 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 HDAC11Q96DB2 347 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 KATNBL1Q9H079 304 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 USP29Q9HBJ7 922 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 CNTN3Q9P232 1028 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 CA12O43570 354 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 CCNB1P14635 433 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 CLNS1AP54105 237 aaKnown RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 IRF9Q00978 393 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 INCA1Q0VD86 236 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 ASPHQ12797 758 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 ZBTB17Q13105 803 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 PLD1Q13393 1074 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 MTFR1Q15390 333 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 FAM187BQ17R55 369 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 CAND1Q86VP6 1230 aaKnown RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 PCSK9Q8NBP7 692 aaKnown RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 ZNF317Q96PQ6 595 aaPredicted RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 SMIM14Q96QK8 99 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 NMUR1Q9HB89 426 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 IPO11Q9UI26 975 aaKnown RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 ZMYND8Q9ULU4 1186 aaPredicted RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 CNTN6Q9UQ52 1028 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 RUVBL2Q9Y230 463 aaKnown RBP7.68□□□□□ -1.18
PKP4-217ENST00000628904 FAM50BQ9Y247 325 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 USH1CQ9Y6N9 552 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 A0A0C4DFX4 3053 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 A0A096LPK6 155 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 EME2A4GXA9 379 aaPredicted RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 NEMP2A6NFY4 417 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 TMEM88BA6NKF7 163 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 PDE5AO76074 875 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 CNTN5O94779 1100 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 NMBRP28336 390 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 RASSF2P50749 326 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 KCNQ1P51787 676 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 TBX4P57082 545 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 MPP1Q00013 466 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 MPP3Q13368 585 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 ZRSR2Q15696 482 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 LRRC73Q5JTD7 316 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 NAPRTQ6XQN6 538 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 TAS2R42Q7RTR8 314 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 C14orf80Q86SX3 495 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 SLC41A1Q8IVJ1 513 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 WDR75Q8IWA0 830 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 LGI2Q8N0V4 545 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 FNIP1Q8TF40 1166 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 ESAMQ96AP7 390 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 NUDCD1Q96RS6 583 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 EBNA1BP2Q99848 306 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 ZNF670Q9BS34 389 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 APOL5Q9BWW9 433 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 TXLNGYQ9BZA5 131 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 PNPOQ9NVS9 261 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 MARCH2Q9P0N8 246 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 SLC2A6Q9UGQ3 507 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 TRIP12Q14669 1992 aaPredicted RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 XIRP2A4UGR9 3374 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 MOXD2PA6NHM9 499 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 NAGLUP54802 743 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 TUSC3Q13454 348 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 TCEA2Q15560 299 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 ESRP1Q6NXG1 681 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 PAQR9Q6ZVX9 377 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 ZNF598Q86UK7 904 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 KCNMB4Q86W47 210 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 HNRNPABQ99729 332 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 EBF4Q9BQW3 602 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 GPR62Q9BZJ7 368 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 BRD8Q9H0E9 1235 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 FAM96AQ9H5X1 160 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 CCSER2Q9H7U1 834 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 NOD2Q9HC29 1040 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 APOBEC2Q9Y235 224 aaKnown RBP7.67□□□□□ -1.18
PKP4-217ENST00000628904 J3KR12 359 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 CKMP06732 381 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 HNRNPLP14866 589 aaKnown RBP eCLIP7.67□□□□□ -1.182e-6■■■■□ 19.5
PKP4-217ENST00000628904 MX2P20592 715 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 HOXD10P28358 340 aa7.67□□□□□ -1.18
PKP4-217ENST00000628904 AXLP30530 894 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms