RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 TNNT1P13805 278 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 GOT1P17174 413 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 AVPR2P30518 371 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 CSKP41240 450 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 PDK2Q15119 407 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 PLEKHG6Q3KR16 790 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 C2orf27AQ580R0 203 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 ODF2Q5BJF6 829 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 PITRM1Q5JRX3 1037 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 ARTNQ5T4W7 220 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 RNF219Q5W0B1 726 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 MBLAC2Q68D91 279 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 Q6ZS52 159 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 TRMT11Q7Z4G4 463 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 MAP7D3Q8IWC1 876 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 SYCE1Q8N0S2 351 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 RNF10Q8N5U6 811 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 ZNF513Q8N8E2 541 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 RTL3Q8N8U3 475 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 TMEM105Q8N8V8 129 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 KIAA1524Q8TCG1 905 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 KCNV2Q8TDN2 545 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 USP33Q8TEY7 942 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 ACDQ96AP0 544 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 LMLNQ96KR4 655 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 ZNF830Q96NB3 372 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 KCNF1Q9H3M0 494 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 PCDH18Q9HCL0 1135 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 DDX56Q9NY93 547 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 VPS28Q9UK41 221 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 NEU3Q9UQ49 428 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 PPP2R2CQ9Y2T4 447 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 STARD13Q9Y3M8 1113 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 HYOU1Q9Y4L1 999 aa19.63■□□□□ 0.73
SQSTM1-216ENST00000626660 A0A0U1RQJ8 604 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 ILVBLA1L0T0 632 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 PSTPIP1O43586 416 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 ASLP04424 464 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 TIE1P35590 1138 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 ETFBP38117 255 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 KIR2DL1P43626 348 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 PLK1P53350 603 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 FUT11Q495W5 492 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 HSF5Q4G112 596 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 ATP13A4Q4VNC1 1196 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 SDE2Q6IQ49 451 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 ZNF783Q6ZMS7 281 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 ADIPOR2Q86V24 386 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 NLRP14Q86W24 1093 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 RPLP0P6Q8NHW5 317 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 ATRIPQ8WXE1 791 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 GOLPH3Q9H4A6 298 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 CWC15Q9P013 229 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 DLGAP2Q9P1A6 1054 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 RCOR3Q9P2K3 495 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 ZNF212Q9UDV6 495 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 DNAI1Q9UI46 699 aa19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.62■□□□□ 0.73
SQSTM1-216ENST00000626660 WASH4PA8MWX3 477 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 CHURC1-FNTBB4DL54 471 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 NPC1O15118 1278 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 KRT1P04264 644 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 MZF1P28698 734 aaPredicted RBP19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 SULT2A1Q06520 285 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 EMC10Q5UCC4 262 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 EGFLAMQ63HQ2 1017 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 ZNF662Q6ZS27 426 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 SPEM1Q8N4L4 309 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 TTC17Q96AE7 1141 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 FEM1AQ9BSK4 669 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 CALN1Q9BXU9 219 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 LZTFL1Q9NQ48 299 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 KLHL11Q9NVR0 708 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 SPATA6Q9NWH7 488 aaPredicted RBP19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 INTS6Q9UL03 887 aaKnown RBP19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 PLA2G4CQ9UP65 541 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 NUP205Q92621 2012 aa19.61■□□□□ 0.73
SQSTM1-216ENST00000626660 LRRD1A4D1F6 860 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 GRID2IPA4D2P6 1211 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 ZSCAN12O43309 604 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 RAMP2O60895 175 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 KLF8O95600 359 aaPredicted RBP19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 DLDP09622 509 aaKnown RBP19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 HNRNPLP14866 589 aaKnown RBP eCLIP19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 ERCC2P18074 760 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 ST8SIA6P61647 398 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 NHLH1Q02575 133 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 GNA12Q03113 381 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 TMEM215Q68D42 235 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 CHPFQ8IZ52 775 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 APCDD1Q8J025 514 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 ALLCQ8N6M5 410 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 DTWD2Q8NBA8 298 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 OR52K2Q8NGK3 314 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 FAM71BQ8TC56 605 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 CSPG4P5Q96PW8 444 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 ZNF670Q9BS34 389 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 C2orf49Q9BVC5 232 aaPredicted RBP19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 MAGEH1Q9H213 219 aa19.6■□□□□ 0.73
SQSTM1-216ENST00000626660 KMT2EQ8IZD2 1858 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms