RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 LIMA1Q9UHB6 759 aaKnown RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 EIF2B4Q9UI10 523 aaKnown RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 VANGL2Q9ULK5 521 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 ASPMQ8IZT6 3477 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 ITIH6Q6UXX5 1313 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 FAM170AA1A519 330 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 GOLGA8SH3BPF8 625 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 ADCY5O95622 1261 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 SEMA4FO95754 770 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 CYP1A1P04798 512 aaPredicted RBP11.16□□□□□ -0.62
SSBP4-215ENST00000625926 ZNF18P17022 549 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 TFE3P19532 575 aaPredicted RBP11.16□□□□□ -0.62
SSBP4-215ENST00000625926 STAT1P42224 750 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 CDH4P55283 916 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 JAM2P57087 298 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 NOMO3P69849 1222 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 CENPCQ03188 943 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 UBXN1Q04323 297 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 SLC14A1Q13336 389 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 SYCP1Q15431 976 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 CST6Q15828 149 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 C5orf22Q49AR2 442 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 C2CD6Q53TS8 623 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 OTUD1Q5VV17 481 aaPredicted RBP11.16□□□□□ -0.62
SSBP4-215ENST00000625926 NAA35Q5VZE5 725 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 CXorf57Q6NSI4 855 aaKnown RBP11.16□□□□□ -0.62
SSBP4-215ENST00000625926 LRSAM1Q6UWE0 723 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 LRRC31Q6UY01 552 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 ARCQ7LC44 396 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 C14orf80Q86SX3 495 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 MMAAQ8IVH4 418 aaKnown RBP11.16□□□□□ -0.62
SSBP4-215ENST00000625926 DEFB124Q8NES8 71 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 NEK11Q8NG66 645 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 OR2I1PQ8NGU4 316 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 SLC20A1Q8WUM9 679 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 SNX19Q92543 992 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 PTPRN2Q92932 1015 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 C1orf74Q96LT6 269 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 FAM129BQ96TA1 746 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 TBCBQ99426 244 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 FEM1AQ9BSK4 669 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 NLRC4Q9NPP4 1024 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 DNAAF2Q9NVR5 837 aaKnown RBP11.16□□□□□ -0.62
SSBP4-215ENST00000625926 FBXL12Q9NXK8 326 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 TMEM59LQ9UK28 342 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 NOCTQ9UK39 431 aaKnown RBP11.16□□□□□ -0.62
SSBP4-215ENST00000625926 ANGPTL2Q9UKU9 493 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 TBC1D30Q9Y2I9 924 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 SIK3Q9Y2K2 1263 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.16□□□□□ -0.62
SSBP4-215ENST00000625926 MYO16Q9Y6X6 1858 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 KIAA1549LQ6ZVL6 1849 aa11.16□□□□□ -0.62
SSBP4-215ENST00000625926 DRGXA6NNA5 263 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 LGALS16A8MUM7 142 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 EPHB6O15197 1021 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 MID1O15344 667 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 RNASEH2AO75792 299 aaKnown RBP11.15□□□□□ -0.62
SSBP4-215ENST00000625926 FSBPO95073 299 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 HOXB3P14651 431 aaPredicted RBP11.15□□□□□ -0.62
SSBP4-215ENST00000625926 CHRNB2P17787 502 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 MMP8P22894 467 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 SLC8A1P32418 973 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 FLT3P36888 993 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 GGCXP38435 758 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 STK19P49842 368 aaPredicted RBP11.15□□□□□ -0.62
SSBP4-215ENST00000625926 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
SSBP4-215ENST00000625926 IRAK1P51617 712 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 SHC2P98077 582 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 ZNF252P-AS1Q0IIN9 211 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 GRIK2Q13002 908 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 IL27RAQ6UWB1 636 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 TRIM72Q6ZMU5 477 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 PIP4P1Q86T03 277 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 C1orf216Q8TAB5 229 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 BIRC7Q96CA5 298 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 ALG14Q96F25 216 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 OMDQ99983 421 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 NAT10Q9H0A0 1025 aaKnown RBP11.15□□□□□ -0.62
SSBP4-215ENST00000625926 OSGEPQ9NPF4 335 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 ANLNQ9NQW6 1124 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 SLC25A13Q9UJS0 675 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 VPS28Q9UK41 221 aa11.15□□□□□ -0.62
SSBP4-215ENST00000625926 A0A1W2PP55 124 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 FAM47DPA6NHR8 397 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 LRRC72A6NJI9 287 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 I6L893 689 aaPredicted RBP11.14□□□□□ -0.63
SSBP4-215ENST00000625926 ATP9BO43861 1147 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 GJB3O75712 270 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 CNTN5O94779 1100 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 ENDOD1O94919 500 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 ADH1BP00325 375 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 IL1BP01584 269 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 CD59P13987 128 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 C5AR1P21730 350 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 CD27P26842 260 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 RDXP35241 583 aaKnown RBP11.14□□□□□ -0.63
SSBP4-215ENST00000625926 PSMD8P48556 350 aa11.14□□□□□ -0.63
SSBP4-215ENST00000625926 CSNK1EP49674 416 aaKnown RBP11.14□□□□□ -0.63
SSBP4-215ENST00000625926 NUMBP49757 651 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms