RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SFMBT2Q5VUG0 894 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 RAP1GAP2Q684P5 730 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 LGI2Q8N0V4 545 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 OR14C36Q8NHC7 312 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 ALG14Q96F25 216 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 SERAC1Q96JX3 654 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 PRMT1Q99873 361 aaKnown RBP11.42□□□□□ -0.58
DDX41-218ENST00000625286 OMDQ99983 421 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 PRORYQ9H606 182 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 ACP6Q9NPH0 428 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 AASDHPPTQ9NRN7 309 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 CA5BQ9Y2D0 317 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 TENM4Q6N022 2769 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 ZNF462Q96JM2 2506 aa11.42□□□□□ -0.58
DDX41-218ENST00000625286 EDDM13A0A1B0GTR0 161 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 LRRC72A6NJI9 287 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 E9PAM4 449 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 RNASEH1O60930 286 aaKnown RBP11.41□□□□□ -0.58
DDX41-218ENST00000625286 RFPL3O75679 317 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 FBXO21O94952 628 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 ABCB4P21439 1286 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 TACR2P21452 398 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 C5AR1P21730 350 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 BMP6P22004 513 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 RXRGP48443 463 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 IRAK1P51617 712 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 YWHAEP62258 255 aaKnown RBP11.41□□□□□ -0.58
DDX41-218ENST00000625286 SEMG2Q02383 582 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 CDH18Q13634 790 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 RTP5Q14D33 572 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 HES3Q5TGS1 186 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 ISM2Q6H9L7 571 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 CXorf57Q6NSI4 855 aaKnown RBP11.41□□□□□ -0.58
DDX41-218ENST00000625286 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.41□□□□□ -0.58
DDX41-218ENST00000625286 PPM1KQ8N3J5 372 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 NT5C1BQ96P26 610 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 SLC4A5Q9BY07 1137 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 SCAND2PQ9GZW5 306 aaPredicted RBP11.41□□□□□ -0.58
DDX41-218ENST00000625286 CNTN6Q9UQ52 1028 aa11.41□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3DA0A087WVF3 549 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3IA0A087WXS9 549 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3EA0A087X179 549 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3KA0A087X1G2 549 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3FA6NER0 549 aaPredicted RBP11.4□□□□□ -0.58
DDX41-218ENST00000625286 KCNU1A8MYU2 1149 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3LB9A6J9 549 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TRIM38O00635 465 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 IL1BP01584 269 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 C1SP09871 688 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3HP0C7X1 549 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 PDGFRAP16234 1089 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 MAT2AP31153 395 aaKnown RBP11.4□□□□□ -0.58
DDX41-218ENST00000625286 PLK1P53350 603 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TAS2R38P59533 333 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 NNTQ13423 1086 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 PROX2Q3B8N5 592 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3GQ6DHY5 549 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3CQ6IPX1 549 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 PCSK4Q6UW60 755 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
DDX41-218ENST00000625286 TBC1D3Q8IZP1 549 aaPredicted RBP11.4□□□□□ -0.58
DDX41-218ENST00000625286 SLC25A45Q8N413 288 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 WDTC1Q8N5D0 677 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 EHBP1Q8NDI1 1231 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 SERPINB11Q96P15 392 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 GSDMAQ96QA5 445 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 ERVMER34-1Q9H9K5 563 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 METTL14Q9HCE5 456 aaKnown RBP11.4□□□□□ -0.58
DDX41-218ENST00000625286 GDF3Q9NR23 364 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 PPM1HQ9ULR3 514 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 OR51B4Q9Y5P0 310 aa11.4□□□□□ -0.58
DDX41-218ENST00000625286 E5RJQ4 531 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 PLRG1O43660 514 aaKnown RBP11.39□□□□□ -0.59
DDX41-218ENST00000625286 SDC3O75056 442 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 TRUB2O95900 331 aaKnown RBP11.39□□□□□ -0.59
DDX41-218ENST00000625286 ADH1BP00325 375 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 GIMD1P0DJR0 217 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 ABCG1P45844 678 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 INSM1Q01101 510 aaPredicted RBP11.39□□□□□ -0.59
DDX41-218ENST00000625286 LRRC63Q05C16 580 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 CNTN1Q12860 1018 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 ELAVL3Q14576 367 aaKnown RBP11.39□□□□□ -0.59
DDX41-218ENST00000625286 INAVAQ3KP66 663 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 POM121L1PQ3SYA9 428 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 ARTNQ5T4W7 220 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 AGBL4Q5VU57 503 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 NAPEPLDQ6IQ20 393 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 TTI2Q6NXR4 508 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 FBXL22Q6P050 247 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 BEND5Q7L4P6 421 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 TMEM110Q86TL2 294 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 CCAR2Q8N163 923 aaKnown RBP11.39□□□□□ -0.59
DDX41-218ENST00000625286 ZNF557Q8N988 423 aaPredicted RBP11.39□□□□□ -0.59
DDX41-218ENST00000625286 MFSD2AQ8NA29 543 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 COL26A1Q96A83 441 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 FAM149B1Q96BN6 582 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 TSG101Q99816 390 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 DDX50Q9BQ39 737 aaKnown RBP11.39□□□□□ -0.59
DDX41-218ENST00000625286 NRSN2Q9GZP1 204 aa11.39□□□□□ -0.59
DDX41-218ENST00000625286 ST7Q9NRC1 585 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms