RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 LIN7CQ9NUP9 197 aaKnown RBP2.83□□□□□ -1.96
CHD2-203ENST00000625243 TMLHEQ9NVH6 421 aa2.83□□□□□ -1.96
CHD2-203ENST00000625243 GAR1Q9NY12 217 aaKnown RBP2.83□□□□□ -1.96
CHD2-203ENST00000625243 MSRB1Q9NZV6 116 aa2.83□□□□□ -1.96
CHD2-203ENST00000625243 NDUFAF4Q9P032 175 aa2.83□□□□□ -1.96
CHD2-203ENST00000625243 GRHPRQ9UBQ7 328 aa2.83□□□□□ -1.96
CHD2-203ENST00000625243 VPS51Q9UID3 782 aa2.83□□□□□ -1.96
CHD2-203ENST00000625243 ANAPC4Q9UJX5 808 aa2.83□□□□□ -1.96
CHD2-203ENST00000625243 PCDHA12Q9UN75 941 aa2.83□□□□□ -1.96
CHD2-203ENST00000625243 FNDC1Q4ZHG4 1894 aaPredicted RBP2.83□□□□□ -1.96
CHD2-203ENST00000625243 CLIC1O00299 241 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 SEPT4O43236 478 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 TLX3O43711 291 aaPredicted RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 DDNO94850 711 aaPredicted RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 TNFRSF6BO95407 300 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 SLC3A2P08195 630 aaKnown RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 DRD1P21728 446 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 CST5P28325 142 aaPredicted RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 MAPK9P45984 424 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 TAF6P49848 677 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 CDK7P50613 346 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 DSCR9P59020 149 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 TXNL4AP83876 142 aaKnown RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 CCDC15Q0P6D6 951 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 KCNJ12Q14500 433 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 GRM4Q14833 912 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 PFKFB3Q16875 520 aaPredicted RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 IZUMO4Q1ZYL8 232 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 ODF3L2Q3SX64 289 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 ALFQ53S48 1182 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 TMEM196Q5HYL7 178 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 CCDC70Q6NSX1 233 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 FAM57BQ71RH2 274 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 TRABD2AQ86V40 505 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 MOGAT3Q86VF5 341 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 C12orf76Q8N812 135 aaPredicted RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 PNPLA1Q8N8W4 532 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 SRFBP1Q8NEF9 429 aaKnown RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 ELP5Q8TE02 316 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 AFG1LQ8WV93 481 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 HMGB4Q8WW32 186 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 REXO5Q96IC2 774 aaKnown RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 FAR2Q96K12 515 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 DDX23Q9BUQ8 820 aaKnown RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 CCDC134Q9H6E4 229 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 ELAC1Q9H777 363 aaKnown RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 USP29Q9HBJ7 922 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 AS3MTQ9HBK9 375 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 NOD2Q9HC29 1040 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 ITM2CQ9NQX7 267 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 WNT16Q9UBV4 365 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 RIMKLBQ9ULI2 386 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 C19orf53Q9UNZ5 99 aaPredicted RBP2.82□□□□□ -1.96
CHD2-203ENST00000625243 PCDHGB3Q9Y5G1 929 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 PCDHGB1Q9Y5G3 927 aa2.82□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3DA0A087WVF3 549 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3IA0A087WXS9 549 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3EA0A087X179 549 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3KA0A087X1G2 549 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 A0A1W2PPC1 479 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3BA6NDS4 549 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3FA6NER0 549 aaPredicted RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 HMGB1P1B2RPK0 211 aaPredicted RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3LB9A6J9 549 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 E7EVH7 732 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 AGPSO00116 658 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 IPO5O00410 1097 aaKnown RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 TAF5LO75529 589 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 FAM155BO75949 473 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 CER1O95813 267 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3HP0C7X1 549 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TMIGD3P0DMS9 266 aaPredicted RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 GYS1P13807 737 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 XBP1P17861 261 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 ADD2P35612 726 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 PBX1P40424 430 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 PCP4P48539 62 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 MCM2P49736 904 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 RBM5P52756 815 aaKnown RBP eCLIP2.81□□□□□ -1.96
CHD2-203ENST00000625243 ACTR2P61160 394 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 RBM6P78332 1123 aaKnown RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 MTAPQ13126 283 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 DNASE1L3Q13609 305 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 MFSD13AQ14CX5 517 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TAF5Q15542 800 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 FBXO47Q5MNV8 452 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3GQ6DHY5 549 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3CQ6IPX1 549 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 JMJD6Q6NYC1 403 aaPredicted RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 CYP26C1Q6V0L0 522 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 RTL10Q7L3V2 364 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 TBC1D3Q8IZP1 549 aaPredicted RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 CLASRPQ8N2M8 674 aaKnown RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 TMEM57Q8N5G2 664 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 METTL25Q8N6Q8 603 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 SLC44A5Q8NCS7 719 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 STT3BQ8TCJ2 826 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 SPPL3Q8TCT6 385 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 GOLGA1Q92805 767 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 CTHRC1Q96CG8 243 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms