RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 RIPK3Q9Y572 518 aa14.42□□□□□ -0.1
LDB3-209ENST00000623056 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.41□□□□□ -0.1
LDB3-209ENST00000623056 H0YJX3 145 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 MATN2O00339 956 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 MSCO60682 206 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 CHRNGP07510 517 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 PDGFRBP09619 1106 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 MLNP12872 115 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 P4HA1P13674 534 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 TCN1P20061 433 aaPredicted RBP14.41□□□□□ -0.1
LDB3-209ENST00000623056 GP5P40197 560 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 GARSP41250 739 aaKnown RBP14.41□□□□□ -0.1
LDB3-209ENST00000623056 PDAP1Q13442 181 aaKnown RBP14.41□□□□□ -0.1
LDB3-209ENST00000623056 ART3Q13508 389 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 DPYSQ14117 519 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 IKBKEQ14164 716 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 C16orf72Q14CZ0 275 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 SURF1Q15526 300 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 KCNT2Q6UVM3 1135 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 DCLK2Q8N568 766 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 CPSF7Q8N684 471 aaKnown RBP14.41□□□□□ -0.1
LDB3-209ENST00000623056 QKIQ96PU8 341 aaKnown RBP eCLIP14.41□□□□□ -0.1
LDB3-209ENST00000623056 OSBPL11Q9BXB4 747 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 MRPL4Q9BYD3 311 aaKnown RBP14.41□□□□□ -0.1
LDB3-209ENST00000623056 PDZD7Q9H5P4 517 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 ZNF385DQ9H6B1 395 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 ZNF302Q9NR11 478 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 RNF146Q9NTX7 359 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 OLAHQ9NV23 265 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 MORF4L1Q9UBU8 362 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 SLC22A2O15244 555 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 TRIM13O60858 407 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 LTFP02788 710 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 MAGEA12P43365 314 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 NUP107P57740 925 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 C1QTNF12Q5T7M4 302 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 BSPRYQ5W0U4 402 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 TMEM198Q66K66 360 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 ELMSAN1Q6PJG2 1045 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 CES3Q6UWW8 571 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 LZTR1Q8N653 840 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 MOCOSQ96EN8 888 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 ATXN7L3BQ96GX2 97 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 TMEM176AQ96HP8 235 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 ANKRD36BP1Q96IX9 119 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 WRNIP1Q96S55 665 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 TMEM79Q9BSE2 394 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 GATA5Q9BWX5 397 aaPredicted RBP14.41□□□□□ -0.1
LDB3-209ENST00000623056 ILKAPQ9H0C8 392 aaPredicted RBP14.41□□□□□ -0.1
LDB3-209ENST00000623056 ACSS2Q9NR19 701 aa14.41□□□□□ -0.1
LDB3-209ENST00000623056 MAFBQ9Y5Q3 323 aaPredicted RBP14.41□□□□□ -0.1
LDB3-209ENST00000623056 KPNA7A9QM74 516 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 HDAC3O15379 428 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 VAPBO95292 243 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 PROZP22891 400 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 MLH1P40692 756 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 OSTNP61366 133 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 SEL1L3Q68CR1 1132 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 HEATR6Q6AI08 1181 aaKnown RBP14.4□□□□□ -0.1
LDB3-209ENST00000623056 KRT80Q6KB66 452 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 TRPC4APQ8TEL6 797 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 LPAR1Q92633 364 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 RMND5BQ96G75 393 aaPredicted RBP14.4□□□□□ -0.1
LDB3-209ENST00000623056 PNPLA3Q9NST1 481 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 SIX4Q9UIU6 781 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 PTPRFP10586 1907 aa14.4□□□□□ -0.1
LDB3-209ENST00000623056 CILPO75339 1184 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 TADA2AO75478 443 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 CSPG5O95196 566 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 F7P08709 466 aaPredicted RBP14.4□□□□□ -0.11
LDB3-209ENST00000623056 CCR10P46092 362 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 CDH15P55291 814 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 NAA20P61599 178 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 TUBA4AP68366 448 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 IRF9Q00978 393 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 RFTN1Q14699 578 aaPredicted RBP14.4□□□□□ -0.11
LDB3-209ENST00000623056 HERC3Q15034 1050 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 GRTP1Q5TC63 336 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 ITPRIPL1Q6GPH6 555 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 PTAR1Q7Z6K3 402 aaPredicted RBP14.4□□□□□ -0.11
LDB3-209ENST00000623056 MYO1HQ8N1T3 1032 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 GIPC3Q8TF64 312 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 SREK1Q8WXA9 508 aaKnown RBP14.4□□□□□ -0.11
LDB3-209ENST00000623056 ISL2Q96A47 359 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 TMA16Q96EY4 203 aaKnown RBP14.4□□□□□ -0.11
LDB3-209ENST00000623056 WNK4Q96J92 1243 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 MARK4Q96L34 752 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 HEXIM2Q96MH2 286 aaKnown RBP14.4□□□□□ -0.11
LDB3-209ENST00000623056 TBCBQ99426 244 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 CPNE1Q99829 537 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 EFCAB1Q9HAE3 211 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 PICK1Q9NRD5 415 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 SYBUQ9NX95 663 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 IGSF9Q9P2J2 1179 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 AFG3L2Q9Y4W6 797 aa14.4□□□□□ -0.11
LDB3-209ENST00000623056 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.4□□□□□ -0.11
LDB3-209ENST00000623056 MYO18AQ92614 2054 aaKnown RBP14.4□□□□□ -0.11
LDB3-209ENST00000623056 MDM4O15151 490 aa14.39□□□□□ -0.11
LDB3-209ENST00000623056 H2AFYO75367 372 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms