RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 MAN2B1O00754 1011 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 LUC7L3O95232 432 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 TYRP14679 529 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 CXCR5P32302 372 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 MAPKAPK2P49137 400 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 CLCN5P51795 746 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 AMPD2Q01433 879 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 TFDP2Q14188 446 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 GAB4Q2WGN9 574 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 ASTLQ6HA08 431 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 TFAP2DQ7Z6R9 452 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 RALGPS2Q86X27 583 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 ZNF557Q8N988 423 aaPredicted RBP20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 BHMTQ93088 406 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 MAK16Q9BXY0 300 aaKnown RBP20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 PLK2Q9NYY3 685 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 TBC1D30Q9Y2I9 924 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 SAR1BQ9Y6B6 198 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 CACNG3O60359 315 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 KRT10P13645 584 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 ZFXP17010 805 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 CTHP32929 405 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 UBXN2BQ14CS0 331 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 TMCO3Q6UWJ1 677 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 BBS12Q6ZW61 710 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 RFX6Q8HWS3 928 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 FAM3CQ92520 227 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 MSANTD3Q96H12 275 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 HERPUD2Q9BSE4 406 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 SLC2A11Q9BYW1 496 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 ETNK2Q9NVF9 386 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 FBXO10Q9UK96 956 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 PI15O43692 258 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 CEP104O60308 925 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 AOC1P19801 751 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 ZNF177Q13360 481 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 PAFAH1B3Q15102 231 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 NCBP2-AS2Q69YL0 99 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 CXorf57Q6NSI4 855 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 SETD3Q86TU7 594 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 MFN1Q8IWA4 741 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 ETFBKMTQ8IXQ9 262 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 UMODL1-AS1Q8N2C9 162 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 RASGEF1CQ8N431 466 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 LZTR1Q8N653 840 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 PLD5Q8N7P1 536 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 PJA1Q8NG27 643 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 FIBINQ8TAL6 211 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 COG1Q8WTW3 980 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 NELL2Q99435 816 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 HEMGNQ9BXL5 484 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 KLC2Q9H0B6 622 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 LTB4R2Q9NPC1 389 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 NDFIP2Q9NV92 336 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 TTC7AQ9ULT0 858 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 NDRG2Q9UN36 371 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 MRPS17Q9Y2R5 130 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 SIT1Q9Y3P8 196 aa20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 MTF2Q9Y483 593 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-221ENST00000622702 ZDBF2Q9HCK1 2354 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 FAM170BA6NMN3 283 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 APOL1O14791 398 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 CST8O60676 142 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 TJP3O95049 919 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 AVPR2P30518 371 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 OR1E1P30953 314 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 GJA4P35212 333 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 OXCT1P55809 520 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 ADCY2Q08462 1091 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 KLF1Q13351 362 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 CDH18Q13634 790 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 LLGL1Q15334 1064 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 C6orf118Q5T5N4 469 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 KAZNQ674X7 775 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 C1orf228Q6PIY5 440 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 TXNDC11Q6PKC3 985 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 SLC13A5Q86YT5 568 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 CCDC117Q8IWD4 279 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 CARNMT1Q8N4J0 409 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 TMEM105Q8N8V8 129 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 XPO6Q96QU8 1125 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 CLEC4EQ9ULY5 219 aa20.36■□□□□ 0.85
PDLIM2-221ENST00000622702 F5P12259 2224 aa20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 H0Y626 953 aa20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 TARSP26639 723 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 SERPINB6P35237 376 aa20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 AFMIDQ63HM1 303 aa20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 ZNF783Q6ZMS7 281 aa20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 NPWQ8N729 165 aa20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 WFDC5Q8TCV5 224 aa20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 CHFRQ96EP1 664 aa20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 NOL6Q9H6R4 1146 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 MFHAS1Q9Y4C4 1052 aa20.35■□□□□ 0.85
PDLIM2-221ENST00000622702 MIA3Q5JRA6 1907 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 WDFY4Q6ZS81 3184 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 ILVBLA1L0T0 632 aa20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 DCNP07585 359 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-221ENST00000622702 TGM2P21980 687 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms