RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 PIGKQ92643 395 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 MRPL38Q96DV4 380 aaKnown RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 MTRRQ9UBK8 725 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 RNF103O00237 685 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 RASGRF2O14827 1237 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 INPP4BO15327 924 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ERBB2P04626 1255 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ERVK-10P10266 1014 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 KELP23276 732 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ERVFC1P60507 584 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 PTK6Q13882 451 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 SPARCL1Q14515 664 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 NCAPHQ15003 741 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 TRIP4Q15650 581 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 EOGTQ5NDL2 527 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CXorf40BQ96DE9 158 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ZDHHC4Q9NPG8 344 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 FAM153AQ9UHL3 310 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 TRMT6Q9UJA5 497 aaKnown RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ERVW-1Q9UQF0 538 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 VPS9D1Q9Y2B5 631 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 PCDHGC5Q9Y5F6 944 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 TRBV23OR9-2A0A075B6M9 112 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 WDR27A2RRH5 827 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CNOT1A5YKK6 2376 aaKnown RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 KCNU1A8MYU2 1149 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 RASA4BC9J798 803 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 F8W810 466 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 EPHB6O15197 1021 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 RASA4O43374 803 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 TYRP14679 529 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 FDFT1P37268 417 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CD86P42081 329 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ABL2P42684 1182 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CENPCQ03188 943 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 AUHQ13825 339 aaKnown RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 DDX39BQ13838 428 aaKnown RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 MMAAQ8IVH4 418 aaKnown RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 EXD1Q8NHP7 514 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CYB5D2Q8WUJ1 264 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 HTR3CQ8WXA8 447 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CPSF2Q9P2I0 782 aaKnown RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 POLR2AP24928 1970 aaKnown RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 LCHNA4D1U4 455 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ERICH4A6NGS2 130 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 COPEO14579 308 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ZNF185O15231 689 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CAV1Q03135 178 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 KCNMA1Q12791 1236 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 MAMLD1Q13495 774 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 RAB33AQ14088 237 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ACAP1Q15027 740 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ADGRF1Q5T601 910 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 DAB2IPQ5VWQ8 1189 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 RFX8Q6ZV50 586 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 IRGQQ8WZA9 623 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ZNF516Q92618 1163 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 PLD4Q96BZ4 506 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 FGD4Q96M96 766 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 TWNKQ96RR1 684 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 WRAP53Q9BUR4 548 aaKnown RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CARD9Q9H257 536 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 HCFC1R1Q9NWW0 138 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 GTSE1Q9NYZ3 720 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 SENP1Q9P0U3 644 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CDH7Q9ULB5 785 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 EIF4E1BA6NMX2 242 aaKnown RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 LEFTY2O00292 366 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 STX1BP61266 288 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 DHX34Q14147 1143 aaKnown RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 ATP13A4Q4VNC1 1196 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 TMCO4Q5TGY1 634 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 MBLAC2Q68D91 279 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 KCTD16Q68DU8 428 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 FAM43BQ6ZT52 329 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 PDCD7Q8N8D1 485 aaKnown RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 STAMBPL1Q96FJ0 436 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 RBM15Q96T37 977 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 DNAJC7Q99615 494 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 TRIM51Q9BSJ1 452 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 DPEP2Q9H4A9 486 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 UBE2ZQ9H832 354 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 ABCB6Q9NP58 842 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 AVENQ9NQS1 362 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 SOHLH2Q9NX45 425 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 KLHL3Q9UH77 587 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 BACE2Q9Y5Z0 518 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 A0A0A6YYK5 440 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 TTI1O43156 1089 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 MZF1P28698 734 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 CAMK2GQ13555 558 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 DLG2Q15700 870 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 EPM2AIP1Q7L775 607 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-229ENST00000622668 LRRN4Q8WUT4 740 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 TTC17Q96AE7 1141 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 HERC2P3Q9BVR0 1158 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 LACRTQ9GZZ8 138 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 CD274Q9NZQ7 290 aa9.27□□□□□ -0.93
HDAC9-229ENST00000622668 TPX2Q9ULW0 747 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms