RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 NTRK1P04629 796 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SPDYE6P0CI01 402 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 CCNA2P20248 432 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 ITGAXP20702 1163 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 CD247P20963 164 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SSTR3P32745 418 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 CAP2P40123 477 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 PTGER2P43116 358 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 TMBIM6P55061 237 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 ECT2LQ008S8 904 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 GNA12Q03113 381 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SLC18A2Q05940 514 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 PDIA2Q13087 525 aaKnown RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 GPR162Q16538 588 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 HSF5Q4G112 596 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 PPP6R3Q5H9R7 873 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 RALGPS1Q5JS13 557 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 FGD3Q5JSP0 725 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 TJAP1Q5JTD0 557 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 KRT39Q6A163 491 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 RNF19BQ6ZMZ0 732 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 GADL1Q6ZQY3 521 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 RALGPS2Q86X27 583 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 RAVER1Q8IY67 606 aaKnown RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 COLGALT2Q8IYK4 626 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 REM2Q8IYK8 340 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 ELMOD2Q8IZ81 293 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 NLGN1Q8N2Q7 840 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 AFAP1L2Q8N4X5 818 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 ASCC1Q8N9N2 400 aaKnown RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SIMC1Q8NDZ2 872 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 VPS37AQ8NEZ2 397 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 CHURC1Q8WUH1 139 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 CPA5Q8WXQ8 436 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 VTI1AQ96AJ9 217 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 CMTM5Q96DZ9 223 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 NT5C1BQ96P26 610 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 WRNIP1Q96S55 665 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 NPLQ9BXD5 320 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 HEMGNQ9BXL5 484 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 TMEM39BQ9GZU3 492 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 ST6GALNAC4Q9H4F1 302 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 VPS37BQ9H9H4 285 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 NEK6Q9HC98 313 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 MAGEE1Q9HCI5 957 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 PCDH12Q9NPG4 1184 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 PARVAQ9NVD7 372 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 DNMT3BQ9UBC3 853 aaKnown RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 ZNF70Q9UC06 446 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 TBX20Q9UMR3 447 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 EIF3LQ9Y262 564 aaKnown RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 COQ4Q9Y3A0 265 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 COL4A5P29400 1685 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 FER1L6Q2WGJ9 1857 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 LRRIQ4A6NIV6 560 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 TAF4O00268 1085 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 DNALI1O14645 258 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 DYRK3O43781 588 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 LYPLA2O95372 231 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 PROCP04070 461 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 UNGP13051 313 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 NCAM1P13591 858 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 NR4A1P22736 598 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SERPINB1P30740 379 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 MAPK4P31152 587 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 NPTX2P47972 431 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SLC26A2P50443 739 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 TAS2R40P59535 323 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 MCCD1P59942 119 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 DSTNP60981 165 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 CYP24A1Q07973 514 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SELPLGQ14242 412 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 LRIT3Q3SXY7 679 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 TCHHL1Q5QJ38 904 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 PLEKHG7Q6ZR37 379 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SV2AQ7L0J3 742 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 HPS6Q86YV9 775 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 CRLF3Q8IUI8 442 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 MAP4K3Q8IVH8 894 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 ARID3BQ8IVW6 561 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 MCOLN2Q8IZK6 566 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 DEFB107AQ8IZN7 70 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 LINC00469Q8N7U9 141 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 HIPK4Q8NE63 616 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 FLAD1Q8NFF5 587 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 GRPEL2Q8TAA5 225 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SYTL5Q8TDW5 730 aaPredicted RBP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 TTC17Q96AE7 1141 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 ZUFSPQ96AP4 578 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 AKT1S1Q96B36 256 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 CFAP36Q96G28 342 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 VPS35Q96QK1 796 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SNX18Q96RF0 628 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SLC29A1Q99808 456 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 VRTNQ9H8Y1 702 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 SP140LQ9H930 580 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 TMEM8AQ9HCN3 771 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 KLHL11Q9NVR0 708 aa7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM49B-202ENST00000622138 GMIPQ9P107 970 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms