RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 ECT2LQ008S8 904 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 INAVAQ3KP66 663 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 COBLL1Q53SF7 1204 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 ZC3H12AQ5D1E8 599 aaKnown RBP17.3■□□□□ 0.36
TARDBP-225ENST00000621715 ZNF658Q5TYW1 1059 aaPredicted RBP17.3■□□□□ 0.36
TARDBP-225ENST00000621715 DENND1BQ6P3S1 775 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 FMR1NBQ8N0W7 255 aaPredicted RBP17.3■□□□□ 0.36
TARDBP-225ENST00000621715 KDM1BQ8NB78 822 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 FRS2Q8WU20 508 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 FAM131CQ96AQ9 280 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 HSFY1Q96LI6 401 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 KREMEN1Q96MU8 473 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 GDF3Q9NR23 364 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 TJP2Q9UDY2 1190 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 ZNF462Q96JM2 2506 aa17.3■□□□□ 0.36
TARDBP-225ENST00000621715 RNASEH1O60930 286 aaKnown RBP17.29■□□□□ 0.36
TARDBP-225ENST00000621715 RTN2O75298 545 aa17.29■□□□□ 0.36
TARDBP-225ENST00000621715 IGLV3-25P01717 112 aa17.29■□□□□ 0.36
TARDBP-225ENST00000621715 TACR2P21452 398 aa17.29■□□□□ 0.36
TARDBP-225ENST00000621715 MAT2AP31153 395 aaKnown RBP17.29■□□□□ 0.36
TARDBP-225ENST00000621715 EIF4EBP2Q13542 120 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-225ENST00000621715 TAF5Q15542 800 aa17.29■□□□□ 0.36
TARDBP-225ENST00000621715 POM121L1PQ3SYA9 428 aa17.29■□□□□ 0.36
TARDBP-225ENST00000621715 PPM1KQ8N3J5 372 aa17.29■□□□□ 0.36
TARDBP-225ENST00000621715 NXPE2Q96DL1 559 aa17.29■□□□□ 0.36
TARDBP-225ENST00000621715 PRMT1Q99873 361 aaKnown RBP17.29■□□□□ 0.36
TARDBP-225ENST00000621715 ACP6Q9NPH0 428 aa17.29■□□□□ 0.36
TARDBP-225ENST00000621715 E9PAM4 449 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 RNF103O00237 685 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 SDC3O75056 442 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 FBXO21O94952 628 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 IL1BP01584 269 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 PDGFRAP16234 1089 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 C5AR1P21730 350 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 RXRGP48443 463 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 NNTQ13423 1086 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 CXorf57Q6NSI4 855 aaKnown RBP17.28■□□□□ 0.36
TARDBP-225ENST00000621715 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.28■□□□□ 0.36
TARDBP-225ENST00000621715 SND1Q7KZF4 910 aaKnown RBP eCLIP17.28■□□□□ 0.36
TARDBP-225ENST00000621715 ENGASEQ8NFI3 743 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 SPATA20Q8TB22 786 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 FAM149B1Q96BN6 582 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 SERPINB11Q96P15 392 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 NT5C1BQ96P26 610 aa17.28■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3DA0A087WVF3 549 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3IA0A087WXS9 549 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3EA0A087X179 549 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3KA0A087X1G2 549 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3FA6NER0 549 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3LB9A6J9 549 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TRIM38O00635 465 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3HP0C7X1 549 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 CENPCQ03188 943 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 RTP5Q14D33 572 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 C6orf118Q5T5N4 469 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3GQ6DHY5 549 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 ISM2Q6H9L7 571 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3CQ6IPX1 549 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 PCSK4Q6UW60 755 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 CHSY1Q86X52 802 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TBC1D3Q8IZP1 549 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-225ENST00000621715 ZNF557Q8N988 423 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-225ENST00000621715 ALG14Q96F25 216 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 UBL7Q96S82 380 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-225ENST00000621715 TSG101Q99816 390 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 DDX50Q9BQ39 737 aaKnown RBP17.27■□□□□ 0.36
TARDBP-225ENST00000621715 SLC4A5Q9BY07 1137 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 CEP83Q9Y592 693 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 AK5Q9Y6K8 562 aa17.27■□□□□ 0.36
TARDBP-225ENST00000621715 E5RJQ4 531 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 PMM2O15305 246 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 ADH1BP00325 375 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 C1SP09871 688 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 GGCXP38435 758 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 TAS2R38P59533 333 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 INSM1Q01101 510 aaPredicted RBP17.26■□□□□ 0.35
TARDBP-225ENST00000621715 LRRC63Q05C16 580 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 ELAVL3Q14576 367 aaKnown RBP17.26■□□□□ 0.35
TARDBP-225ENST00000621715 PROX2Q3B8N5 592 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 AGBL4Q5VU57 503 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 NAPEPLDQ6IQ20 393 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 CCAR2Q8N163 923 aaKnown RBP17.26■□□□□ 0.35
TARDBP-225ENST00000621715 SLC25A45Q8N413 288 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 MFSD2AQ8NA29 543 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 SLC39A7Q92504 469 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 SCAND2PQ9GZW5 306 aaPredicted RBP17.26■□□□□ 0.35
TARDBP-225ENST00000621715 ERVMER34-1Q9H9K5 563 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 ST7Q9NRC1 585 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 CNTN6Q9UQ52 1028 aa17.26■□□□□ 0.35
TARDBP-225ENST00000621715 TYW5A2RUC4 315 aaKnown RBP17.25■□□□□ 0.35
TARDBP-225ENST00000621715 KCNU1A8MYU2 1149 aa17.25■□□□□ 0.35
TARDBP-225ENST00000621715 PLRG1O43660 514 aaKnown RBP17.25■□□□□ 0.35
TARDBP-225ENST00000621715 BRINP1O60477 761 aa17.25■□□□□ 0.35
TARDBP-225ENST00000621715 TRUB2O95900 331 aaKnown RBP17.25■□□□□ 0.35
TARDBP-225ENST00000621715 BMP6P22004 513 aa17.25■□□□□ 0.35
TARDBP-225ENST00000621715 HNF1BP35680 557 aa17.25■□□□□ 0.35
TARDBP-225ENST00000621715 ARRB1P49407 418 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-225ENST00000621715 CNTN1Q12860 1018 aa17.25■□□□□ 0.35
TARDBP-225ENST00000621715 GSDMAQ96QA5 445 aa17.25■□□□□ 0.35
TARDBP-225ENST00000621715 NRSN2Q9GZP1 204 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms