RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 SNX30Q5VWJ9 437 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 C3orf62Q6ZUJ4 267 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 TAX1BP1Q86VP1 789 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 CAND1Q86VP6 1230 aaKnown RBP13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 PDCD7Q8N8D1 485 aaKnown RBP13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 GDAP1Q8TB36 358 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 USP33Q8TEY7 942 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 CFAP36Q96G28 342 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 C1orf74Q96LT6 269 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 BRD8Q9H0E9 1235 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 PIH1D1Q9NWS0 290 aaKnown RBP13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 EURLQ9NYK6 297 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 KIAA1671Q9BY89 1806 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 ALPK3Q96L96 1907 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 SPAG7O75391 227 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 PHBP35232 272 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 CHSY1Q86X52 802 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 AGGF1Q8N302 714 aaeCLIP13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 KLHL23Q8NBE8 558 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 HERVK_113Q902F9 699 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 MAML1Q92585 1016 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 SLC39A8Q9C0K1 460 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 TRPM5Q9NZQ8 1165 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 DNMT3LQ9UJW3 386 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 TTLL3Q9Y4R7 772 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 FAM169AQ9Y6X4 670 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 GOLGA6L7A0A1B0GV03 622 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 RASA4BC9J798 803 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 RASA4O43374 803 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 JCHAINP01591 159 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 TPSB2P20231 275 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 DRD4P21917 467 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 MAGEA6P43360 314 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 PPP3CCP48454 512 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 COG7P83436 770 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 TPSAB1Q15661 275 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 PARP6Q2NL67 630 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 TMEM240Q5SV17 173 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 HECTD3Q5T447 861 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 TMC7Q7Z402 723 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 CIR1Q86X95 450 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 ARHGAP12Q8IWW6 846 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 LRRC34Q8IZ02 419 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 RTL3Q8N8U3 475 aaKnown RBP13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 MYRFLQ96LU7 910 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 RPRD1AQ96P16 312 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 RAD9AQ99638 391 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 FRMD8Q9BZ67 464 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 MTIF3Q9H2K0 278 aaKnown RBP13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 RXFP1Q9HBX9 757 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 LGALS13Q9UHV8 139 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 RABGEF1Q9UJ41 708 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 INSL5Q9Y5Q6 135 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 MAD1L1Q9Y6D9 718 aa13.01□□□□□ -0.33
TNFAIP3-209ENST00000619035 NUP205Q92621 2012 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZBTB24O43167 697 aaPredicted RBP13□□□□□ -0.33
TNFAIP3-209ENST00000619035 MTSS1O43312 755 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 COCHO43405 550 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 CNTN5O94779 1100 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 IGLV3-27P01718 113 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ATP2A2P16615 1042 aaKnown RBP13□□□□□ -0.33
TNFAIP3-209ENST00000619035 RING1Q06587 406 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 SPARCL1Q14515 664 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ALFQ53S48 1182 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ARTNQ5T4W7 220 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 FBXL22Q6P050 247 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 KLHDC10Q6PID8 442 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZNF534Q76KX8 674 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 LZTR1Q8N653 840 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 MCUQ8NE86 351 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 FBF1Q8TES7 1133 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 CENPTQ96BT3 561 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 CHMP6Q96FZ7 201 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 TRMT2BQ96GJ1 504 aaKnown RBP13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZNF317Q96PQ6 595 aaPredicted RBP13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZYG11BQ9C0D3 744 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZBP1Q9H171 429 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 DONSONQ9NYP3 566 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 TEX264Q9Y6I9 313 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 SHROOM3Q8TF72 1996 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 LCHNA4D1U4 455 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 C2orf78A6NCI8 922 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 TLL1O43897 1013 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 LILRB3O75022 631 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 CPP00450 1065 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 CNPP09543 421 aaKnown RBP13□□□□□ -0.33
TNFAIP3-209ENST00000619035 CTSAP10619 480 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 IRF1P10914 325 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 NUMBP49757 651 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 EPHB3P54753 998 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 SARNPP82979 210 aaKnown RBP13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZNF33AQ06730 810 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 CBLBQ13191 982 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 NUGGCQ68CJ6 796 aa13□□□□□ -0.33
TNFAIP3-209ENST00000619035 DNAJB7Q7Z6W7 309 aaPredicted RBP13□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZNF354CQ86Y25 554 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms