RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 RNF168Q8IYW5 571 aaPredicted RBP26■■□□□ 1.75
VEGFC-202ENST00000618562 VPS52Q8N1B4 723 aa26■■□□□ 1.75
VEGFC-202ENST00000618562 DNAJC5GQ8N7S2 189 aa26■■□□□ 1.75
VEGFC-202ENST00000618562 TFB1MQ8WVM0 346 aaKnown RBP26■■□□□ 1.75
VEGFC-202ENST00000618562 THOC1Q96FV9 657 aaKnown RBP26■■□□□ 1.75
VEGFC-202ENST00000618562 SERAC1Q96JX3 654 aa26■■□□□ 1.75
VEGFC-202ENST00000618562 LGMNQ99538 433 aa26■■□□□ 1.75
VEGFC-202ENST00000618562 KLF6Q99612 283 aaPredicted RBP26■■□□□ 1.75
VEGFC-202ENST00000618562 MANSC1Q9H8J5 431 aa26■■□□□ 1.75
VEGFC-202ENST00000618562 ARHGEF38Q9NXL2 777 aa26■■□□□ 1.75
VEGFC-202ENST00000618562 CDY1Q9Y6F8 540 aa26■■□□□ 1.75
VEGFC-202ENST00000618562 TRIM43BA6NCK2 446 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 HACD1B0YJ81 288 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 ETV4P43268 484 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 MAGEA3P43357 314 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 KIF2BQ8N4N8 673 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 TRIM43Q96BQ3 446 aaPredicted RBP25.99■■□□□ 1.75
VEGFC-202ENST00000618562 IGSF21Q96ID5 467 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 RAB3IPQ96QF0 476 aaPredicted RBP25.99■■□□□ 1.75
VEGFC-202ENST00000618562 LRMDAQ9H2I8 198 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 GMIPQ9P107 970 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 NR2E3Q9Y5X4 410 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 ABHD14A-ACY1A0A1B0GW23 586 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 FAM92AA1XBS5 289 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 HGSO14964 777 aaPredicted RBP25.99■■□□□ 1.75
VEGFC-202ENST00000618562 ADAM12O43184 909 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 TIMP1P01033 207 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 CSF2RAP15509 400 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 DEFB103AP81534 67 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 SMARCB1Q12824 385 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 MGAT5BQ3V5L5 792 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 TP53INP2Q8IXH6 220 aa25.99■■□□□ 1.75
VEGFC-202ENST00000618562 SEPT5Q99719 369 aaPredicted RBP25.99■■□□□ 1.75
VEGFC-202ENST00000618562 OXCT2Q9BYC2 517 aaPredicted RBP25.99■■□□□ 1.75
VEGFC-202ENST00000618562 KRT37O76014 449 aa25.98■■□□□ 1.75
VEGFC-202ENST00000618562 LRIG2O94898 1065 aa25.98■■□□□ 1.75
VEGFC-202ENST00000618562 HAPLN1P10915 354 aaPredicted RBP25.98■■□□□ 1.75
VEGFC-202ENST00000618562 LGSNQ5TDP6 509 aa25.98■■□□□ 1.75
VEGFC-202ENST00000618562 FAXCQ5TGI0 409 aa25.98■■□□□ 1.75
VEGFC-202ENST00000618562 HEATR6Q6AI08 1181 aaKnown RBP25.98■■□□□ 1.75
VEGFC-202ENST00000618562 DENND5BQ6ZUT9 1274 aa25.98■■□□□ 1.75
VEGFC-202ENST00000618562 PRPF39Q86UA1 669 aaKnown RBP25.98■■□□□ 1.75
VEGFC-202ENST00000618562 ZNF689Q96CS4 500 aaPredicted RBP25.98■■□□□ 1.75
VEGFC-202ENST00000618562 EZRP15311 586 aaKnown RBP25.97■■□□□ 1.75
VEGFC-202ENST00000618562 DUSP4Q13115 394 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 PRKD1Q15139 912 aaPredicted RBP25.97■■□□□ 1.75
VEGFC-202ENST00000618562 USP41Q3LFD5 358 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 BRMS1LQ5PSV4 323 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 FBXO22Q8NEZ5 403 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 HTR3CQ8WXA8 447 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 INPP5DQ92835 1189 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 EPAS1Q99814 870 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 OSBPL2Q9H1P3 480 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 RC3H2Q9HBD1 1191 aaKnown RBP25.97■■□□□ 1.75
VEGFC-202ENST00000618562 PRDM5Q9NQX1 630 aaPredicted RBP25.97■■□□□ 1.75
VEGFC-202ENST00000618562 MTRRQ9UBK8 725 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 SNRPAP09012 282 aaKnown RBP25.97■■□□□ 1.75
VEGFC-202ENST00000618562 PYGBP11216 843 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 ZNF135P52742 658 aaPredicted RBP25.97■■□□□ 1.75
VEGFC-202ENST00000618562 PARP6Q2NL67 630 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 SLC8B1Q6J4K2 584 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 FAM117BQ6P1L5 589 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 NPHS2Q9NP85 383 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 TRIM33Q9UPN9 1127 aa25.97■■□□□ 1.75
VEGFC-202ENST00000618562 WDR27A2RRH5 827 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 WDR91A4D1P6 747 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 IL1BP01584 269 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 APOEP02649 317 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 RPL17P18621 184 aaKnown RBP25.96■■□□□ 1.75
VEGFC-202ENST00000618562 YWHAQP27348 245 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 PDK1Q15118 436 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 MSANTD2Q6P1R3 559 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 NLRP9Q7RTR0 991 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 CCDC91Q7Z6B0 441 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 CTAGE3PQ8IX95 158 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 NPWQ8N729 165 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 PPM1NQ8N819 430 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 C2orf15Q8WU43 125 aaKnown RBP25.96■■□□□ 1.75
VEGFC-202ENST00000618562 SPATA17Q96L03 361 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 TACO1Q9BSH4 297 aaKnown RBP25.96■■□□□ 1.75
VEGFC-202ENST00000618562 PRDM12Q9H4Q4 367 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 PLAC1Q9HBJ0 212 aa25.96■■□□□ 1.75
VEGFC-202ENST00000618562 XAB2Q9HCS7 855 aaKnown RBP25.96■■□□□ 1.75
VEGFC-202ENST00000618562 CCR1P32246 355 aa25.95■■□□□ 1.75
VEGFC-202ENST00000618562 PSMD5Q16401 504 aa25.95■■□□□ 1.75
VEGFC-202ENST00000618562 ARHGAP18Q8N392 663 aa25.95■■□□□ 1.75
VEGFC-202ENST00000618562 TMEM237Q96Q45 408 aa25.95■■□□□ 1.75
VEGFC-202ENST00000618562 TSSK1BQ9BXA7 367 aa25.95■■□□□ 1.75
VEGFC-202ENST00000618562 NEU3Q9UQ49 428 aa25.95■■□□□ 1.75
VEGFC-202ENST00000618562 TRIM49D1C9J1S8 452 aa25.95■■□□□ 1.74
VEGFC-202ENST00000618562 RTN3O95197 1032 aaPredicted RBP25.95■■□□□ 1.74
VEGFC-202ENST00000618562 TGDSO95455 350 aa25.95■■□□□ 1.74
VEGFC-202ENST00000618562 METTL18O95568 372 aa25.95■■□□□ 1.74
VEGFC-202ENST00000618562 EPHB2P29323 1055 aa25.95■■□□□ 1.74
VEGFC-202ENST00000618562 PPP2R5DQ14738 602 aa25.95■■□□□ 1.74
VEGFC-202ENST00000618562 FBXO32Q969P5 355 aa25.95■■□□□ 1.74
VEGFC-202ENST00000618562 SERPINB11Q96P15 392 aa25.95■■□□□ 1.74
VEGFC-202ENST00000618562 FAM111AQ96PZ2 611 aa25.95■■□□□ 1.74
VEGFC-202ENST00000618562 HAPLN3Q96S86 360 aa25.95■■□□□ 1.74
VEGFC-202ENST00000618562 TRIM55Q9BYV6 548 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms