RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ATG4AQ8WYN0 398 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 EDEM1Q92611 657 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 DPF2Q92785 391 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 CBWD1Q9BRT8 395 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 SPATA5L1Q9BVQ7 753 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 RNPEPQ9H4A4 650 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 THAP1Q9NVV9 213 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 TNPO3Q9Y5L0 923 aaKnown RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 PDHXO00330 501 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 SNPHO15079 494 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 NTSR2O95665 410 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 PAX3P23760 479 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 CCZ1BP86790 482 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 CCZ1P86791 482 aaPredicted RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 LYPLAL1Q5VWZ2 237 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 C4orf19Q8IY42 314 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 FDXACB1Q9BRP7 624 aaPredicted RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 TMEM120AQ9BXJ8 343 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 ZFYVE1Q9HBF4 777 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 HMX1Q9NP08 348 aaPredicted RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 MID1IP1Q9NPA3 183 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 XPNPEP3Q9NQH7 507 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 INPP4BO15327 924 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 MSCO60682 206 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 TSPAN19P0C672 248 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 LPIN1Q14693 890 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 SCARA3Q6AZY7 606 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC27A1Q6PCB7 646 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 MFSD7Q6UXD7 560 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 SPOCD1Q6ZMY3 1216 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 PAGE2Q7Z2X7 111 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 TMEM86AQ8N2M4 240 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 VCPIP1Q96JH7 1222 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 C2orf49Q9BVC5 232 aaPredicted RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 FAM126AQ9BYI3 521 aaPredicted RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 PRDM16Q9HAZ2 1276 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 MBD2Q9UBB5 411 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 PLAGL2Q9UPG8 496 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 CYP1A1P04798 512 aaPredicted RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 AMD1P17707 334 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 MMP13P45452 471 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 MYL6P60660 151 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 SNRPD1P62314 119 aaKnown RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 DOK6Q6PKX4 331 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 FAM126BQ8IXS8 530 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 CHPFQ8IZ52 775 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 MDM1Q8TC05 714 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 CXorf40AQ8TE69 158 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 HIC2Q96JB3 615 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 POP1Q99575 1024 aaKnown RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 C6orf62Q9GZU0 229 aaPredicted RBP11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 KLHL25Q9H0H3 589 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 EHD4Q9H223 541 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 ABHD16BQ9H3Z7 469 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 DNPEPQ9ULA0 475 aa11.37□□□□□ -0.59
CCDC144B-208ENST00000618081 NWD1Q149M9 1564 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 RGL2O15211 777 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 FGF10O15520 208 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 OR10H2O60403 315 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 KCNH1O95259 989 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 BCL10O95999 233 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 MYBL2P10244 700 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 RIPOR1Q6ZS17 1223 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 METTL3Q86U44 580 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 CASKIN2Q8WXE0 1202 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 MTFR1LQ9H019 292 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 RXFP1Q9HBX9 757 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 PCDHGC5Q9Y5F6 944 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 KCNMA1Q12791 1236 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 FSCN1Q16658 493 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 BTN2A1Q7KYR7 527 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNF720Q7Z2F6 126 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 MRPL17Q9NRX2 175 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 TMEM216Q9P0N5 145 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNF624Q9P2J8 865 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 SHOC2Q9UQ13 582 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 NQO1P15559 274 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 NUMBP49757 651 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ACAP1Q15027 740 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 RSBN1Q5VWQ0 802 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 PEX5LQ8IYB4 626 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 TBCDQ9BTW9 1192 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 POLR1EQ9GZS1 481 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 SUCOQ9UBS9 1254 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 GPN3Q9UHW5 284 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 GSTK1Q9Y2Q3 226 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 RPL3P39023 403 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNF57Q68EA5 555 aaPredicted RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 RORBQ92753 470 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 INVSQ9Y283 1065 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 ENO4A6NNW6 628 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 DGKAP23743 735 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 NDST1P52848 882 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 GIT2Q14161 759 aa11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 FRG1Q14331 258 aaKnown RBP11.36□□□□□ -0.59
CCDC144B-208ENST00000618081 RPTNQ6XPR3 784 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms