RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PLA2G4AP47712 749 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 GALK2Q01415 458 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 TLE2Q04725 743 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 BST2Q10589 180 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 LRMPQ12912 555 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 EPC2Q52LR7 807 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ARL6IP4Q66PJ3 421 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 PLA2G4FQ68DD2 849 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 TRIM67Q6ZTA4 783 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CTAGE6Q86UF2 777 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CTAGE4Q8IX94 777 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 UBR7Q8N806 425 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 MAGEB18Q96M61 343 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 MEIS3Q99687 375 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 A0A1W2PPH5 198 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 DRGXA6NNA5 263 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 GLSO94925 669 aaPredicted RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 LRRC63Q05C16 580 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 FUT2Q10981 343 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ITPK1Q13572 414 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 TMEM200AQ86VY9 491 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CLIC6Q96NY7 704 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 TEFMQ96QE5 360 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 APOL1O14791 398 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 NR1D1P20393 614 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 RXRGP48443 463 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CENPAP49450 140 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 BASP1P80723 227 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 LRRC41Q15345 812 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 C8orf74Q6P047 294 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 TAGAPQ8N103 731 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CPNE2Q96FN4 548 aaPredicted RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 WDR18Q9BV38 432 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 MRIQ9BWK5 157 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CNOT10Q9H9A5 744 aaKnown RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 MAN2B2Q9Y2E5 1009 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 MYO1FO00160 1098 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 COL9A1P20849 921 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 FOXO4P98177 505 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 ECH1Q13011 328 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 PGM5Q15124 567 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 MCUR1Q96AQ8 359 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 CABS1Q96KC9 395 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 FAM83CQ9BQN1 747 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 GPN2Q9H9Y4 310 aaPredicted RBP3.43□□□□□ -1.86
LPP-220ENST00000617246 RGS18Q9NS28 235 aa3.43□□□□□ -1.86
LPP-220ENST00000617246 FOXO6A8MYZ6 492 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 PRR33A8MZF0 331 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 PEX1O43933 1283 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 NBNO60934 754 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SYNGR4O95473 234 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 NFICP08651 508 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CCND3P30281 292 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 PPARDQ03181 441 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CBX2Q14781 532 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 TRADDQ15628 312 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 RASIP1Q5U651 963 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CNSTQ6PJW8 725 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ZNF227Q86WZ6 799 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CCDC105Q8IYK2 499 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 STK40Q8N2I9 435 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TRIML2Q8N7C3 387 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CATSPER2Q96P56 530 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 PRMT1Q99873 361 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 RXFP1Q9HBX9 757 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SGK2Q9HBY8 427 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 KRT82Q9NSB4 513 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CYP27B1O15528 508 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 MGEA5O60502 916 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CLASP2O75122 1294 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 SRP72O76094 671 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 ALKBH2Q6NS38 261 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ILDR2Q71H61 639 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 NELFCDQ8IXH7 590 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 KLHDC7BQ96G42 594 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TMEM63CQ9P1W3 806 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 REV1Q9UBZ9 1251 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ZMAT5Q9UDW3 170 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 MAPK8IP1Q9UQF2 711 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ARIH1Q9Y4X5 557 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 FXR1P51114 621 aaKnown RBP eCLIP3.42□□□□□ -1.86
LPP-220ENST00000617246 MLF2Q15773 248 aaPredicted RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 GTF2IRD2BQ6EKJ0 949 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 AAGABQ6PD74 315 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 GTF2IRD2Q86UP8 949 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 PSTKQ8IV42 348 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 NECAB1Q8N987 351 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 C12orf65Q9H3J6 166 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 FAM105AQ9NUU6 356 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SLC12A4Q9UP95 1085 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 TRAF3IP3Q9Y228 551 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ZSWIM8A7E2V4 1837 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 CYB5BO43169 146 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 SERPINF2P08697 491 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 PRKAG1P54619 331 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 EEFSECP57772 596 aaKnown RBP3.42□□□□□ -1.86
LPP-220ENST00000617246 GRM4Q14833 912 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 LRRC24Q50LG9 513 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 ARMC3Q5W041 872 aa3.42□□□□□ -1.86
LPP-220ENST00000617246 PAGE2Q7Z2X7 111 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms