RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 KCNU1A8MYU2 1149 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 SELPP16109 830 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 NFKB1P19838 968 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 MRPL58Q14197 206 aaKnown RBP16.09■□□□□ 0.17
NR1H3-235ENST00000616973 PRPSAP1Q14558 356 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 SETDB1Q15047 1291 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 MROH9Q5TGP6 573 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 TMEM135Q86UB9 458 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 ARHGAP12Q8IWW6 846 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 UNC5BQ8IZJ1 945 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 NUP93Q8N1F7 819 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 ANKLE1Q8NAG6 615 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 TBC1D31Q96DN5 1066 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 CERS2Q96G23 380 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 AGAP3Q96P47 875 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 ECT2Q9H8V3 914 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 NMUR1Q9HB89 426 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 ABI2Q9NYB9 513 aaPredicted RBP16.09■□□□□ 0.17
NR1H3-235ENST00000616973 IL37Q9NZH6 218 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 FNIP2Q9P278 1114 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 DNAJB4Q9UDY4 337 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 SFMBT1Q9UHJ3 866 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 VANGL2Q9ULK5 521 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 PCDHB5Q9Y5E4 795 aa16.09■□□□□ 0.17
NR1H3-235ENST00000616973 A0A1W2PQH9 124 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 ARHGAP42A6NI28 874 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 TADA2AO75478 443 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 USP1O94782 785 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 PGFP49763 221 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 DBN1Q16643 649 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 VARS2Q5ST30 1063 aaKnown RBP16.08■□□□□ 0.16
NR1H3-235ENST00000616973 RWDD4Q6NW29 188 aaKnown RBP16.08■□□□□ 0.16
NR1H3-235ENST00000616973 SCN4BQ8IWT1 228 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 NDUFAF2Q8N183 169 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 SLAIN1Q8ND83 568 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 RAB3IL1Q8TBN0 382 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 C1orf74Q96LT6 269 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.08■□□□□ 0.16
NR1H3-235ENST00000616973 SIK2Q9H0K1 926 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 CREBZFQ9NS37 354 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 PIH1D1Q9NWS0 290 aaKnown RBP16.08■□□□□ 0.16
NR1H3-235ENST00000616973 RPS6KL1Q9Y6S9 549 aa16.08■□□□□ 0.16
NR1H3-235ENST00000616973 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.07■□□□□ 0.16
NR1H3-235ENST00000616973 FAM237BA0A1B0GVD1 139 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 OR6C75A6NL08 312 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 WASH4PA8MWX3 477 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 BIRC5O15392 142 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 TRPA1O75762 1119 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 JCHAINP01591 159 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 SRGAP2BP0DMP2 458 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 CCNB1P14635 433 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 HNRNPH1P31943 449 aaKnown RBP16.07■□□□□ 0.16
NR1H3-235ENST00000616973 AFMIDQ63HM1 303 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 LRRC49Q8IUZ0 686 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 CELF6Q96J87 481 aaKnown RBP16.07■□□□□ 0.16
NR1H3-235ENST00000616973 FCRL2Q96LA5 508 aaPredicted RBP16.07■□□□□ 0.16
NR1H3-235ENST00000616973 LRRC37BQ96QE4 947 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 CPNE1Q99829 537 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 KLC4Q9NSK0 619 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 CHKBQ9Y259 395 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 TLR6Q9Y2C9 796 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 PRG3Q9Y2Y8 225 aaPredicted RBP16.07■□□□□ 0.16
NR1H3-235ENST00000616973 MSI1O43347 362 aaKnown RBP16.07■□□□□ 0.16
NR1H3-235ENST00000616973 ATP5HO75947 161 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 SLC2A3P11169 496 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 BGNP21810 368 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 CDK7P50613 346 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 BFSP2Q13515 415 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 GRTP1Q5TC63 336 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 NAPEPLDQ6IQ20 393 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 KYAT3Q6YP21 454 aaKnown RBP16.07■□□□□ 0.16
NR1H3-235ENST00000616973 LINC00523Q86TU6 105 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 RASSF3Q86WH2 238 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 ATPAF2Q8N5M1 289 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.07■□□□□ 0.16
NR1H3-235ENST00000616973 STKLD1Q8NE28 680 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 SLC39A13Q96H72 371 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 FCRL3Q96P31 734 aaPredicted RBP16.07■□□□□ 0.16
NR1H3-235ENST00000616973 PPP1R2P1Q96PQ5 205 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 IL12RB2Q99665 862 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 TRIM55Q9BYV6 548 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 SLC13A1Q9BZW2 595 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 IL22Q9GZX6 179 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 MYLK2Q9H1R3 596 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 PCMTD2Q9NV79 361 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 OSER1Q9NX31 292 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 SIRPGQ9P1W8 387 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 ADAM28Q9UKQ2 775 aa16.07■□□□□ 0.16
NR1H3-235ENST00000616973 FAM92AA1XBS5 289 aa16.06■□□□□ 0.16
NR1H3-235ENST00000616973 ENPP3O14638 875 aa16.06■□□□□ 0.16
NR1H3-235ENST00000616973 GP5P40197 560 aa16.06■□□□□ 0.16
NR1H3-235ENST00000616973 MLLT6P55198 1093 aaPredicted RBP16.06■□□□□ 0.16
NR1H3-235ENST00000616973 OLIG2Q13516 323 aa16.06■□□□□ 0.16
NR1H3-235ENST00000616973 PLEKHG4Q58EX7 1191 aa16.06■□□□□ 0.16
NR1H3-235ENST00000616973 ZNF280DQ6N043 979 aa16.06■□□□□ 0.16
NR1H3-235ENST00000616973 CYB5D1Q6P9G0 228 aa16.06■□□□□ 0.16
NR1H3-235ENST00000616973 ASRGL1Q7L266 308 aa16.06■□□□□ 0.16
NR1H3-235ENST00000616973 CNTD1Q8N815 330 aa16.06■□□□□ 0.16
NR1H3-235ENST00000616973 RTL3Q8N8U3 475 aaKnown RBP16.06■□□□□ 0.16
NR1H3-235ENST00000616973 DNAAF3Q8N9W5 541 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms