RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SIKE1Q9BRV8 207 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 C17orf80Q9BSJ5 609 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 FAM126AQ9BYI3 521 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 GMEB2Q9UKD1 530 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 TAF6LQ9Y6J9 622 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 COLEC10Q9Y6Z7 277 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 MAN2B1O00754 1011 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 SGTAO43765 313 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 ERN1O75460 977 aaKnown RBP9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 HNRNPA1P09651 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 EPB42P16452 691 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 C11orf74Q86VG3 221 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 FAM162AQ96A26 154 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 FAIM2Q9BWQ8 316 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 ELOVL6Q9H5J4 265 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 KLHL28Q9NXS3 571 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 NDOR1Q9UHB4 597 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 SLC38A8A6NNN8 435 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 CCND3P30281 292 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 HPCAL1P37235 193 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 PLOD1Q02809 727 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZBTB41Q5SVQ8 909 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 FAM45BPQ6NSW5 357 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 FAM183BPQ6ZVS7 135 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 PHYKPLQ8IUZ5 450 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 TSTD1Q8NFU3 115 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZFP28Q8NHY6 868 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 FAM45AQ8TCE6 357 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 PLEKHA8Q96JA3 519 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 IL22Q9GZX6 179 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 PRDM10Q9NQV6 1147 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 CLDND1Q9NY35 253 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 ADA2Q9NZK5 511 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 RUVBL2Q9Y230 463 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 SNX5Q9Y5X3 404 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 TRDMT1O14717 391 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 IL1BP01584 269 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 WDR45BQ5MNZ6 344 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 POLNQ7Z5Q5 900 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 TC2NQ8N9U0 490 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 TTC29Q8NA56 475 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 GPATCH2LQ9NWQ4 482 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 STOML1Q9UBI4 398 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 MRTO4Q9UKD2 239 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 STAU1O95793 577 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 CYP1A2P05177 515 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 RPA3P35244 121 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 MAGOHP61326 146 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 FEM1CQ96JP0 617 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 NXF3Q9H4D5 531 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 RRAGDQ9NQL2 400 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 ACOT9Q9Y305 439 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 FAM237AA0A1B0GTK4 181 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 C22orf31O95567 290 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 FGF1P05230 155 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 PTPN7P35236 360 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 VEGFBP49765 207 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 RPP38P78345 283 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 MAPK7Q13164 816 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZNHIT3Q15649 155 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 RBM43Q6ZSC3 357 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 C11orf96Q7Z7L8 435 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZNF555Q8NEP9 628 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 OR56A4Q8NGH8 313 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 RIT1Q92963 219 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 ILKAPQ9H0C8 392 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 GPAMQ9HCL2 828 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 TDRKHQ9Y2W6 561 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 A0A0B4J269 797 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 F8W810 466 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 KITP10721 976 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 FGFR1P11362 822 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 PCSK2P16519 638 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 SKIV2L2P42285 1042 aaKnown RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 PRIM2P49643 509 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 YBEYP58557 167 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 AP2B1P63010 937 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 SP2Q02086 613 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 ARHGAP1Q07960 439 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 RTL10Q7L3V2 364 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 PIGZQ86VD9 579 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 SCUBE3Q8IX30 993 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 TCAIMQ8N3R3 496 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 EMID1Q96A84 441 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 SFXN1Q9H9B4 322 aa9.92□□□□□ -0.82
TNFRSF9-204ENST00000615230 BTNL10A8MVZ5 291 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 C8AP07357 584 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 PEX5P50542 639 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 PURAQ00577 322 aaKnown RBP9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 TARBP2Q15633 366 aaKnown RBP9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 E2F4Q16254 413 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 DOK6Q6PKX4 331 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 MYO19Q96H55 970 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 TRIT1Q9H3H1 467 aaKnown RBP9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 MIEF1Q9NQG6 463 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 TRMT13Q9NUP7 481 aaKnown RBP9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 PSME2Q9UL46 239 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 SLC27A5Q9Y2P5 690 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 CAPN7Q9Y6W3 813 aa9.91□□□□□ -0.82
TNFRSF9-204ENST00000615230 NUP188Q5SRE5 1749 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms