RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 EME1Q96AY2 570 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 CFAP36Q96G28 342 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PBKQ96KB5 322 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 CAPZA3Q96KX2 299 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 TBCBQ99426 244 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PKMYT1Q99640 499 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 HINFPQ9BQA5 517 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 ACBD6Q9BR61 282 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 ZBED2Q9BTP6 218 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 SLC4A5Q9BY07 1137 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 FOXP3Q9BZS1 431 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 THAP2Q9H0W7 228 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 EPB41L1Q9H4G0 881 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 TMBIM4Q9HC24 238 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PARVAQ9NVD7 372 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 TAS2R14Q9NYV8 317 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 NXF1Q9UBU9 619 aaKnown RBP9.03□□□□□ -0.96
VPS11-206ENST00000614944 ZC3H7BQ9UGR2 993 aaKnown RBP9.03□□□□□ -0.96
VPS11-206ENST00000614944 SNX12Q9UMY4 172 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PCDHB7Q9Y5E2 793 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 CAPN6Q9Y6Q1 641 aa9.03□□□□□ -0.96
VPS11-206ENST00000614944 PLXNA3P51805 1871 aa9.02□□□□□ -0.96
VPS11-206ENST00000614944 PPEF2O14830 753 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 SNPHO15079 494 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 HDAC3O15379 428 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 RNGTTO60942 597 aaKnown RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 KRT20P35900 424 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 GPD2P43304 727 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 KRT6CP48668 564 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 SCNN1GP51170 649 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 ELAVL2Q12926 359 aaKnown RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 MAPRE1Q15691 268 aaKnown RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 FAM171BQ6P995 826 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 PIGWQ7Z7B1 504 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 MCRS1Q96EZ8 462 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 HSFY1Q96LI6 401 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 MRPL45Q9BRJ2 306 aaKnown RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 DCLRE1BQ9H816 532 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 RC3H2Q9HBD1 1191 aaKnown RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 KLK14Q9P0G3 267 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 HYOU1Q9Y4L1 999 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 PCDHGA11Q9Y5H2 935 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 KIAA1671Q9BY89 1806 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 MICAL2O94851 1124 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 OAZ2O95190 189 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 M6PRP20645 277 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 PCSK1P29120 753 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 HNF1BP35680 557 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 GNL1P36915 607 aaPredicted RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 PPP2R2BQ00005 443 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 GALNTL6Q49A17 601 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 LRRC38Q5VT99 294 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 MFSD5Q6N075 450 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 METTL3Q86U44 580 aaKnown RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 RAVER1Q8IY67 606 aaKnown RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 ANKRD52Q8NB46 1076 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 DBF4BQ8NFT6 615 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 PYROXD1Q8WU10 500 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 CD101Q93033 1021 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 SH3KBP1Q96B97 665 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 ZNF689Q96CS4 500 aaPredicted RBP9.02□□□□□ -0.97
VPS11-206ENST00000614944 FAM84AQ96KN4 292 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 ZFP42Q96MM3 310 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 APOL6Q9BWW8 343 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 RWDD3Q9Y3V2 267 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 NME7Q9Y5B8 376 aa9.02□□□□□ -0.97
VPS11-206ENST00000614944 DPYSL4O14531 572 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 CYB561D2O14569 222 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 YKT6O15498 198 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 ARHGEF15O94989 841 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 MOCS3O95396 460 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 CDH3P22223 829 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 ALAS2P22557 587 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 VPS41P49754 854 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 CLK3P49761 638 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 PPARDQ03181 441 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 PDE1CQ14123 709 aaPredicted RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 IKBKEQ14164 716 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 MRPL58Q14197 206 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 LRRC26Q2I0M4 334 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 BTBD8Q5XKL5 378 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 NT5DC3Q86UY8 548 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 CMTR2Q8IYT2 770 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 ELMOD1Q8N336 334 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 RASGEF1CQ8N431 466 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 SLC35F5Q8WV83 523 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 SENP8Q96LD8 212 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 TWNKQ96RR1 684 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 LPIN3Q9BQK8 851 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 PLGRKTQ9HBL7 147 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 DUSP10Q9Y6W6 482 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 PCP4L1A6NKN8 68 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 OR5K4A6NMS3 321 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 H3BUI4 141 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 PQBP1O60828 265 aaKnown RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 TFPTP0C1Z6 253 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 OCM2P0CE71 109 aa9.01□□□□□ -0.97
VPS11-206ENST00000614944 OCMP0CE72 109 aaPredicted RBP9.01□□□□□ -0.97
VPS11-206ENST00000614944 POLR2CP19387 275 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms