RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 KRT14P02533 472 aa18■□□□□ 0.47
SREK1-216ENST00000612404 GARSP41250 739 aaKnown RBP18■□□□□ 0.47
SREK1-216ENST00000612404 MAPKAPK2P49137 400 aa18■□□□□ 0.47
SREK1-216ENST00000612404 GALNT2Q10471 571 aa18■□□□□ 0.47
SREK1-216ENST00000612404 SYDE1Q6ZW31 735 aaPredicted RBP18■□□□□ 0.47
SREK1-216ENST00000612404 UMODL1-AS1Q8N2C9 162 aa18■□□□□ 0.47
SREK1-216ENST00000612404 ST13P5Q8NFI4 369 aaPredicted RBP18■□□□□ 0.47
SREK1-216ENST00000612404 DDI1Q8WTU0 396 aa18■□□□□ 0.47
SREK1-216ENST00000612404 MSLNLQ96KJ4 702 aa18■□□□□ 0.47
SREK1-216ENST00000612404 ERP44Q9BS26 406 aa18■□□□□ 0.47
SREK1-216ENST00000612404 DPH5Q9H2P9 285 aa18■□□□□ 0.47
SREK1-216ENST00000612404 KIF9Q9HAQ2 790 aa18■□□□□ 0.47
SREK1-216ENST00000612404 ZNF212Q9UDV6 495 aa18■□□□□ 0.47
SREK1-216ENST00000612404 CDH7Q9ULB5 785 aa18■□□□□ 0.47
SREK1-216ENST00000612404 NUP210Q8TEM1 1887 aaPredicted RBP18■□□□□ 0.47
SREK1-216ENST00000612404 ZSCAN5DPP0CG00 497 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 ETS1P14921 441 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 WEE1P30291 646 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 STIP1P31948 543 aaKnown RBP17.99■□□□□ 0.47
SREK1-216ENST00000612404 MTHFRP42898 656 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 NDST2P52849 883 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 NRLP54845 237 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 COL19A1Q14993 1142 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 CCDC85BQ15834 202 aaPredicted RBP17.99■□□□□ 0.47
SREK1-216ENST00000612404 Q7L0L9 218 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 ZNF354CQ86Y25 554 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 CPXM2Q8N436 756 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 ATPAF2Q8N5M1 289 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 GLIS1Q8NBF1 620 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 DEPDC1BQ8WUY9 529 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 MYLIPQ8WY64 445 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 PARD6BQ9BYG5 372 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 SEPT10Q9P0V9 454 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.99■□□□□ 0.47
SREK1-216ENST00000612404 CFAP69A5D8W1 941 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 RAMP2O60895 175 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 TCF3P15923 654 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 GBP2P32456 591 aaPredicted RBP17.99■□□□□ 0.47
SREK1-216ENST00000612404 PAPOLAP51003 745 aaKnown RBP17.99■□□□□ 0.47
SREK1-216ENST00000612404 ZNF177Q13360 481 aaPredicted RBP17.99■□□□□ 0.47
SREK1-216ENST00000612404 PTK6Q13882 451 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 PRKD1Q15139 912 aaPredicted RBP17.99■□□□□ 0.47
SREK1-216ENST00000612404 FAM182AQ5T1J6 154 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 AFMIDQ63HM1 303 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 CHST9Q7L1S5 443 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 CARNMT1Q8N4J0 409 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 HTR3CQ8WXA8 447 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 RSPRY1Q96DX4 576 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 FERMT1Q9BQL6 677 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 NOL6Q9H6R4 1146 aaKnown RBP17.99■□□□□ 0.47
SREK1-216ENST00000612404 USP29Q9HBJ7 922 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 PLK2Q9NYY3 685 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 TBC1D14Q9P2M4 693 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 WNT6Q9Y6F9 365 aa17.99■□□□□ 0.47
SREK1-216ENST00000612404 RASA4BC9J798 803 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 H0Y626 953 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 GFRA2O00451 464 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 RASA4O43374 803 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 CYBBP04839 570 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 VAV1P15498 845 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 ADCY8P40145 1251 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 POLD3Q15054 466 aaPredicted RBP17.98■□□□□ 0.47
SREK1-216ENST00000612404 MPPE1Q53F39 396 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 ARHGAP36Q6ZRI8 547 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 IFT20Q8IY31 132 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 IFT81Q8WYA0 676 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 HDAC11Q96DB2 347 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 HMCESQ96FZ2 354 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 LRRC3BQ96PB8 259 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 BRD8Q9H0E9 1235 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 LINC00597Q9H2U6 94 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 POMKQ9H5K3 350 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 RETREG1Q9H6L5 497 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 NEU2Q9Y3R4 380 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 SHROOM3Q8TF72 1996 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 ARHGAP42A6NI28 874 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 H3BQ06 376 aaPredicted RBP17.98■□□□□ 0.47
SREK1-216ENST00000612404 NUMBP49757 651 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 PPIDQ08752 370 aaKnown RBP17.98■□□□□ 0.47
SREK1-216ENST00000612404 TRADDQ15628 312 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 C6orf118Q5T5N4 469 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 DUPD1Q68J44 220 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 SMRP1Q8NCR6 262 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 P2RY11Q96G91 374 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 MYADMQ96S97 322 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 SNX24Q9Y343 169 aa17.98■□□□□ 0.47
SREK1-216ENST00000612404 SLC9A3R1O14745 358 aaPredicted RBP17.97■□□□□ 0.47
SREK1-216ENST00000612404 RHOCP08134 193 aa17.97■□□□□ 0.47
SREK1-216ENST00000612404 ACTN2P35609 894 aa17.97■□□□□ 0.47
SREK1-216ENST00000612404 CDH18Q13634 790 aa17.97■□□□□ 0.47
SREK1-216ENST00000612404 SKIV2LQ15477 1246 aaKnown RBP17.97■□□□□ 0.47
SREK1-216ENST00000612404 CASKIN2Q8WXE0 1202 aa17.97■□□□□ 0.47
SREK1-216ENST00000612404 CDX2Q99626 313 aaPredicted RBP17.97■□□□□ 0.47
SREK1-216ENST00000612404 PCDH9Q9HC56 1237 aa17.97■□□□□ 0.47
SREK1-216ENST00000612404 CD207Q9UJ71 328 aa17.97■□□□□ 0.47
SREK1-216ENST00000612404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 KCNK1O00180 336 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 STK10O94804 968 aaKnown RBP17.96■□□□□ 0.47
SREK1-216ENST00000612404 VSNL1P62760 191 aa17.96■□□□□ 0.47
SREK1-216ENST00000612404 GPS1Q13098 491 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms