RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	PCED1B	Q96HM7	432 aa		13.21	□□□□□ -0.3
SMTN-222	ENST00000612341	ZNF778	Q96MU6	729 aa		13.21	□□□□□ -0.3
SMTN-222	ENST00000612341	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.21	□□□□□ -0.3
SMTN-222	ENST00000612341	DOCK3	Q8IZD9	2030 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	ARHGAP42	A6NI28	874 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	SPECC1L-ADORA2A	F8WAN1	911 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	PLIN3	O60664	434 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	TBX10	O75333	385 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	GSR	P00390	522 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	C6orf222	P0C671	652 aa	Predicted RBP	13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	GNAT1	P11488	350 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	NUMB	P49757	651 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	SLC25A3	Q00325	362 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	NIPAL4	Q0D2K0	466 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	SNX30	Q5VWJ9	437 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	RWDD4	Q6NW29	188 aa	Known RBP	13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	RBM12B	Q8IXT5	1001 aa	Known RBP	13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	PLD6	Q8N2A8	252 aa	Known RBP	13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	DCLK2	Q8N568	766 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	EFCAB3	Q8N7B9	438 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	FAM81A	Q8TBF8	368 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	CERS2	Q96G23	380 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	CYP4F11	Q9HBI6	524 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	VANGL2	Q9ULK5	521 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	BAG2	O95816	211 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	FGF3	P11487	239 aa	Predicted RBP	13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	PTPN3	P26045	913 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	PAPOLA	P51003	745 aa	Known RBP	13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	KRT72	Q14CN4	511 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	MBLAC2	Q68D91	279 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	PIWIL2	Q8TC59	973 aa	Known RBP	13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	DNAJC9	Q8WXX5	260 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	TTC1	Q99614	292 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	CHRAC1	Q9NRG0	131 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	SNX15	Q9NRS6	342 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	NMRK1	Q9NWW6	199 aa		13.2	□□□□□ -0.3
SMTN-222	ENST00000612341	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	ZNF487	B1APH4	448 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	GLRA3	O75311	464 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	SNN	O75324	88 aa	Predicted RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	ZMPSTE24	O75844	475 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	KCNE1	P15382	129 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	IRF9	Q00978	393 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	TEDDM1	Q5T9Z0	273 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	MARK2	Q7KZI7	788 aa	Known RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	SPNS2	Q8IVW8	549 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	HIPK4	Q8NE63	616 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	ACVR1C	Q8NER5	493 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	CCDC124	Q96CT7	223 aa	Known RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	SMO	Q99835	787 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	SYT15	Q9BQS2	421 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	STOML1	Q9UBI4	398 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	CAPN14	A8MX76	684 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.19	□□□□□ -0.3	2e-7	■■■■■ 28.4
SMTN-222	ENST00000612341	PSMG1	O95456	288 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	JCHAIN	P01591	159 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	HOXD8	P13378	290 aa	Predicted RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	ARRB2	P32121	409 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	EPHB1	P54762	984 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	PCLAF	Q15004	111 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	DBN1	Q16643	649 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	SPDYA	Q5MJ70	313 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	KYAT3	Q6YP21	454 aa	Known RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	ARHGAP22	Q7Z5H3	698 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	C3orf58	Q8NDZ4	430 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	NRG4	Q8WWG1	115 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	TRIM4	Q9C037	500 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	DNAI2	Q9GZS0	605 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	BFAR	Q9NZS9	450 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	TAGLN3	Q9UI15	199 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	NUDT5	Q9UKK9	219 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	GNE	Q9Y223	722 aa	Known RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	APOBEC2	Q9Y235	224 aa	Known RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	C17orf102	A2RUQ5	167 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	NVL	O15381	856 aa	Known RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	ALDH1A2	O94788	518 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	NFKB1	P19838	968 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	GLUD2	P49448	558 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	CDC42EP1	Q00587	391 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	ZBTB17	Q13105	803 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	C1orf146	Q5VVC0	180 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.19	□□□□□ -0.3	5e-8	■■■■■ 204.6
SMTN-222	ENST00000612341	ENDOV	Q8N8Q3	282 aa	Known RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	PPP4R1	Q8TF05	950 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	PARK7	Q99497	189 aa	Known RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	OSBPL1A	Q9BXW6	950 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	TKTL2	Q9H0I9	626 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	MIOS	Q9NXC5	875 aa		13.19	□□□□□ -0.3
SMTN-222	ENST00000612341	DCLK1	O15075	740 aa		13.18	□□□□□ -0.3
SMTN-222	ENST00000612341	RALB	P11234	206 aa		13.18	□□□□□ -0.3
SMTN-222	ENST00000612341	MLN	P12872	115 aa		13.18	□□□□□ -0.3
SMTN-222	ENST00000612341	NAT1	P18440	290 aa		13.18	□□□□□ -0.3
SMTN-222	ENST00000612341	WARS	P23381	471 aa	Known RBP	13.18	□□□□□ -0.3
SMTN-222	ENST00000612341	GP5	P40197	560 aa		13.18	□□□□□ -0.3
SMTN-222	ENST00000612341	SCNN1G	P51170	649 aa		13.18	□□□□□ -0.3
SMTN-222	ENST00000612341	DPYS	Q14117	519 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms